RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 A0A1W2PNU3 283 aaPredicted RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 GOLGA8OA6NCC3 632 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 LRIT2A6NDA9 550 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 EFCAB7A8K855 629 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 TMEM150CB9EJG8 249 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 GOLGA8NF8WBI6 632 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SLC28A1O00337 649 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SAP18O00422 153 aaKnown RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 NDUFS4O43181 175 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 MAP3K7O43318 606 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SRPX2O60687 465 aaPredicted RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 B3GALT4O96024 378 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SERPINA6P08185 405 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 CDK4P11802 303 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SERPINB1P30740 379 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 CSTF2P33240 577 aaKnown RBP eCLIP16.29■□□□□ 0.23e-8■■■□□ 16.2
NDUFA11-201ENST00000308961 AQP5P55064 265 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 ZNF33BQ06732 778 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 CSTF3Q12996 717 aaKnown RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 TUBB8Q3ZCM7 444 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 TOR1AIP1Q5JTV8 583 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 DEPDC1Q5TB30 811 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 KIRREL3Q8IZU9 778 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 ARHGEF39Q8N4T4 335 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 AFAP1L2Q8N4X5 818 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 AGBL5Q8NDL9 886 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 RERGQ96A58 199 aaPredicted RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 C19orf60Q96EN9 201 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 RNF31Q96EP0 1072 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 CMTM7Q96FZ5 175 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 APIPQ96GX9 242 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 ELAC2Q9BQ52 826 aaKnown RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 RTKNQ9BST9 563 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 TRIM55Q9BYV6 548 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 APMAPQ9HDC9 416 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 PSD3Q9NYI0 1048 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 SLC12A4Q9UP95 1085 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 CLCA2Q9UQC9 943 aa16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 RUVBL1Q9Y265 456 aaKnown RBP16.29■□□□□ 0.2
NDUFA11-201ENST00000308961 MSL3P1P0C860 447 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 PTX3P26022 381 aaPredicted RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 GSTM2P28161 218 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 EPHA3P29320 983 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 HK2P52789 917 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 TBL3Q12788 808 aaKnown RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 PWP1Q13610 501 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 ADPRMQ3LIE5 342 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 C10orf62Q5T681 223 aaPredicted RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 KHDRBS2Q5VWX1 349 aaKnown RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 DTWD1Q8N5C7 304 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 GBP7Q8N8V2 638 aaPredicted RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 AMER3Q8N944 861 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 CAMKVQ8NCB2 501 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 MS4A6EQ96DS6 147 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 SEC16BQ96JE7 1060 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 MAELQ96JY0 434 aaKnown RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 OR52B2Q96RD2 323 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 SORBS1Q9BX66 1292 aaKnown RBP16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 AKTIPQ9H8T0 292 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 BRF2Q9HAW0 419 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 PRM3Q9NNZ6 103 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 PPT2Q9UMR5 302 aa16.28■□□□□ 0.2
NDUFA11-201ENST00000308961 PTPRZ1P23471 2315 aaPredicted RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 A0A0G2JN53 185 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 FAM149AA5PLN7 773 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 TRPC5OSA6NMA1 111 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 SRRM3A6NNA2 597 aaPredicted RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 TMX2-CTNND1H3BSU7 103 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 RTCAO00442 366 aaKnown RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 DIAPH2O60879 1101 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 PEX11AO75192 247 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 KLHL18O94889 574 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 SMIM10L1P0DMW3 83 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 TROVE2P10155 538 aaKnown RBP eCLIP16.27■□□□□ 0.29e-8■■■■■ 35.4
NDUFA11-201ENST00000308961 HSD3B1P14060 373 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 HSD3B2P26439 372 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 ETV5P41161 510 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 RAB8AP61006 207 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 PHEXP78562 749 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 CBX1P83916 185 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 MC2RQ01718 297 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 ACY1Q03154 408 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 FOXM1Q08050 763 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 TARDBPQ13148 414 aaKnown RBP eCLIP16.27■□□□□ 0.27e-8■■□□□ 12.7
NDUFA11-201ENST00000308961 TUBB3Q13509 450 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 CUL3Q13618 768 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 KIAA0040Q15053 153 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 LARP4Q71RC2 724 aaKnown RBP eCLIP16.27■□□□□ 0.22e-10■■■■□ 23.5
NDUFA11-201ENST00000308961 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 ZNF655Q8N720 491 aaPredicted RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 UTP15Q8TED0 518 aaKnown RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 CHTF18Q8WVB6 975 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 ADAMTS14Q8WXS8 1223 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 N4BP2L2Q92802 583 aaPredicted RBP16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 PMEPA1Q969W9 287 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 FAM122AQ96E09 287 aa16.27■□□□□ 0.2
NDUFA11-201ENST00000308961 SMIM10Q96HG1 83 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms