RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 A0A1W2PP18 115 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 TRBC2A0A5B9 178 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 GSAPA4D1B5 854 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 FAM221BA6H8Z2 402 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 BBIP1A8MTZ0 92 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 LMO7DNF2Z398 122 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 H0YHG0 523 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 FXYD1O00168 92 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 EEDO75530 441 aaKnown RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 LRATO95237 230 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 CCNDBP1O95273 360 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 STATHP02808 62 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 MAPK1P28482 360 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 TIA1P31483 386 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 GRIA3P42263 894 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 LSSP48449 732 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 CLDN8P56748 225 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 KCNK10P57789 538 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PPP1CAP62136 330 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PHC1P78364 1004 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PHEXP78562 749 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 BNIP3Q12983 259 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 ART3Q13508 389 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 MMEL1Q495T6 779 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SPIN4Q56A73 249 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 C16orf89Q6UX73 402 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 COMMD6Q7Z4G1 85 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PAQR7Q86WK9 346 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 RIMKLAQ8IXN7 391 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 ULK2Q8IYT8 1036 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PGAM4Q8N0Y7 254 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 METTL4Q8N3J2 472 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 ARL14Q8N4G2 192 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 CREB3L4Q8TEY5 395 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 TSPEARQ8WU66 669 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 RSC1A1Q92681 617 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 METTL2AQ96IZ6 378 aaKnown RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 BBC3Q96PG8 261 aaPredicted RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SERPINI1Q99574 410 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SARGQ9BW04 601 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SORBS1Q9BX66 1292 aaKnown RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF717Q9BY31 904 aaPredicted RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 DPY30Q9C005 99 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PITHD1Q9GZP4 211 aaPredicted RBP6.66□□□□□ -1.34
PTCD2-201ENST00000308077 WDR41Q9HAD4 459 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PRM3Q9NNZ6 103 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 FSCN3Q9NQT6 498 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SIRT5Q9NXA8 310 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PACSIN3Q9UKS6 424 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 DOLKQ9UPQ8 538 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 NDUFAF1Q9Y375 327 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
PTCD2-201ENST00000308077 OR5K3A6NET4 321 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ANKDD1BA6NHY2 528 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 C4orf51C9J302 202 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 PLPP1O14494 284 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ANGPT2O15123 496 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 CFLARO15519 480 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 MGRN1O60291 552 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 PDE5AO76074 875 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 GBAP04062 536 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 GIMD1P0DJR0 217 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 MAGP20916 626 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 PTX3P26022 381 aaPredicted RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 HNRNPH1P31943 449 aaKnown RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 MLLT3P42568 568 aaPredicted RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 FASLGP48023 281 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 RAP1GDS1P52306 607 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 CYP4F3Q08477 520 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 HYAL2Q12891 473 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 TEAD4Q15561 434 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ZIC1Q15915 447 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 FAM174BQ3ZCQ3 159 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 COQ5Q5HYK3 327 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SPANXN4Q5MJ08 99 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 DEPDC1Q5TB30 811 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 KHDRBS2Q5VWX1 349 aaKnown RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 PEAR1Q5VY43 1037 aaPredicted RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 FCRL6Q6DN72 434 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 GALNT18Q6P9A2 607 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLC2A7Q6PXP3 512 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SPESP1Q6UW49 350 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 HACD2Q6Y1H2 254 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF438Q7Z4V0 828 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 UBE3DQ7Z6J8 389 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF605Q86T29 641 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SCUBE1Q8IWY4 988 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 RBM12BQ8IXT5 1001 aaKnown RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLC25A45Q8N413 288 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLC22A18Q96BI1 424 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 FCRL4Q96PJ5 515 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 F2RL3Q96RI0 385 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 MACROD1Q9BQ69 325 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLC39A3Q9BRY0 314 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms