RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 STMN4Q9H169 189 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 IPPKQ9H8X2 491 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SYNPO2LQ9H987 977 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MKS1Q9NXB0 559 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF282Q9UDV7 671 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PCTPQ9UKL6 214 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TCFL5Q9UL49 500 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STK38LQ9Y2H1 464 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 A0A088AWK7 358 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CDC14CA4D256 554 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 H0YIG0 161 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TERTO14746 1132 aaKnown RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CLEC3AO75596 197 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SUPT7LO94864 414 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NSA2O95478 260 aaKnown RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OTCP00480 354 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SERPINA6P08185 405 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF888P0CJ79 500 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 EPORP19235 508 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ITGAXP20702 1163 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF10P21506 573 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CASP2P42575 452 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 HERVK_113P63132 956 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SLC18A2Q05940 514 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TGM3Q08188 693 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DSG2Q14126 1118 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ERV3-1Q14264 604 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TOR1AIP1Q5JTV8 583 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TTC19Q6DKK2 380 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TRIM40Q6P9F5 258 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OVCH1Q7RTY7 1134 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RAB43Q86YS6 212 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KCT2Q8NC54 265 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SREK1Q8WXA9 508 aaKnown RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 GAL3ST3Q96A11 431 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CRELD1Q96HD1 420 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FAR2Q96K12 515 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MAGEB10Q96LZ2 347 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TMEM237Q96Q45 408 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CENPKQ9BS16 269 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ERVK-6Q9BXR3 956 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PRORYQ9H606 182 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NOL11Q9H8H0 719 aaKnown RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 WDR54Q9H977 334 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 COPS7BQ9H9Q2 264 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SEMA4BQ9NPR2 832 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 C14orf105Q9NVL8 296 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 COPG2Q9UBF2 871 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TRPC4Q9UBN4 977 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ADGRE2Q9UHX3 823 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PTRH2Q9Y3E5 179 aaKnown RBP10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FRYQ5TBA9 3013 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PTPRQQ9UMZ3 2332 aa10.45□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FOXS1O43638 330 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DLX3O60479 287 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PLIN3O60664 434 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 WFS1O76024 890 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KLHL18O94889 574 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MED26O95402 600 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CLDN9O95484 217 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MLYCDO95822 493 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PROCP04070 461 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CAPN1P07384 714 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SBK3P0C264 359 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ALOX12P18054 663 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 WT1P19544 449 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CD22P20273 847 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PRKAA2P54646 552 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NAA20P61599 178 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RHDQ02161 417 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PCDH1Q08174 1060 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ASPHQ12797 758 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DDX39BQ13838 428 aaKnown RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 E2F2Q14209 437 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 UGT8Q16880 541 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CFAP157Q5JU67 520 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF678Q5SXM1 525 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 BEND6Q5SZJ8 279 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MFSD4BQ5TF39 518 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MRPL14Q6P1L8 145 aaKnown RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SH2D5Q6ZV89 423 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 COX15Q7KZN9 410 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TMEM151AQ8N4L1 468 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DTWD1Q8N5C7 304 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 BANPQ8N9N5 519 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR9A4Q8NGU2 314 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR2Y1Q8NGV0 311 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF483Q8TF39 744 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MIEF2Q96C03 454 aa10.44□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MOCOSQ96EN8 888 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms