RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ARPC2O15144 300 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 CPNE3O75131 537 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 HLA-DQB2P05538 268 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 GBX2P52951 348 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 C2orf73Q8N5S3 287 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 SEC14L1Q92503 715 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 TFGQ92734 400 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 UCK2Q9BZX2 261 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 EDARQ9UNE0 448 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 MYADML2A6NDP7 307 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 CPSF4LA6NMK7 179 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 ITGA10O75578 1167 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 ADARP55265 1226 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 ARL9Q6T311 187 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 RSPO2Q6UXX9 243 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 DLK2Q6UY11 383 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 CHERPQ8IWX8 916 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 IFT27Q9BW83 186 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 MED28Q9H204 178 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 PAK6Q9NQU5 681 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 PRODH2Q9UF12 536 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 FKBP7Q9Y680 259 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 TRIM64CA6NLI5 447 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 GLP1RP43220 463 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 CLCNKAP51800 687 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM63BQ5T3F8 832 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 NXPE1Q8N323 547 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 KDM1BQ8NB78 822 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 DDX1Q92499 740 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 GLYATL1Q969I3 302 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 A0A0G2JMP0 313 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 PRPS1L1P21108 318 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 HNRNPA2B1P22626 353 aaKnown RBP8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 FECHP22830 423 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 S100A2P29034 98 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 ARPC4P59998 168 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 HERC3Q15034 1050 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 MLIPQ5VWP3 458 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 IL22RA1Q8N6P7 574 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 OR4M2Q8NGB6 313 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 OR5L2Q8NGL0 311 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 KCTD4Q8WVF5 259 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 STRA6Q9BX79 667 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 KCNIP3Q9Y2W7 256 aa8.08□□□□□ -1.12
PCDHB1-201ENST00000306549 KIR2DS5A0A0G2JLQ3 304 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 A0A0G2JNG1 304 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 KIR2DS3K7RE56 304 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LPLP06858 475 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 KCNQ1P51787 676 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 HSPB3Q12988 150 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 KIR2DS5Q14953 304 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM35AQ53FP2 167 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SIRPB2Q5JXA9 342 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 B3GNT9Q6UX72 402 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TSSK3Q96PN8 268 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CLSTN3Q9BQT9 956 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 GPR62Q9BZJ7 368 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 C14orf166Q9Y224 244 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ADAM18Q9Y3Q7 739 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF878C9JN71 531 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TP53I11O14683 189 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 HERVK_113P63132 956 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 MPP2Q14168 576 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LRRC66Q68CR7 880 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 FTMTQ8N4E7 242 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CNTD1Q8N815 330 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF611Q8N823 705 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 OR10H4Q8NGA5 316 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 OR6K6Q8NGW6 343 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF347Q96SE7 839 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ERVK-6Q9BXR3 956 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 AP1M2Q9Y6Q5 423 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 A0A1W2PPC1 479 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TBX18O95935 607 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 MAGEA2P43356 314 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CRISP3P54108 245 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NR1H2P55055 460 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 KCNJ2P63252 427 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ACY1Q03154 408 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CD47Q08722 323 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 DECR1Q16698 335 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SYPL2Q5VXT5 272 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CRELD2Q6UXH1 353 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ROPN1LQ96C74 230 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 C16orf58Q96GQ5 468 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NPLQ9BXD5 320 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PITHD1Q9GZP4 211 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ACTL8Q9H568 366 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 RAB9BQ9NP90 201 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PACSIN3Q9UKS6 424 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms