RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LDB1Q86U70 411 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF565Q8N9K5 539 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 LMLNQ96KR4 655 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PFDN5Q99471 154 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CUEDC1Q9NWM3 386 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 KCNN3Q9UGI6 736 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1W2PQ45 241 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1W2PQY0 241 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 NPIPA5E9PKD4 350 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 FLRT2O43155 660 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 LRRTM2O43300 516 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TPST2O60704 377 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 STBD1O95210 358 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IFNA2P01563 188 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CHRNA1P02708 482 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 VEGFAP15692 232 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 S100PP25815 95 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 YAP1P46937 504 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PSMA6P60900 246 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SCGB2B2Q4G0G5 96 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM220Q6QAJ8 160 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 MOB2Q70IA6 237 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PARGQ86W56 976 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 RGL4Q8IZJ4 473 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 HAVCR2Q8TDQ0 301 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 WACQ9BTA9 647 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 POTEKPQ9BYX7 375 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM184CQ9NVA4 438 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 NPIPA1Q9UND3 350 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 B8ZZF3 427 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 OAS1P00973 400 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF14P17017 642 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 GALNT2Q10471 571 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CEACAM20Q6UY09 585 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ASB18Q6ZVZ8 466 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZC3H3Q8IXZ2 948 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CAMKVQ8NCB2 501 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SDHAF3Q9NRP4 125 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 EME2A4GXA9 379 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PCDHGA12O60330 932 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IFNA1P01562 189 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 EPOP01588 193 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 GLP1RP43220 463 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 HNRNPA0Q13151 305 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CDCA2Q69YH5 1023 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SHQ1Q6PI26 577 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ARL9Q6T311 187 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 OR6K2Q8NGY2 324 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ING5Q8WYH8 240 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 DUS2Q9NX74 493 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TAS2R8Q9NYW2 309 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IRF6O14896 467 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 RPS3P23396 243 aaKnown RBP eCLIP7.41□□□□□ -1.226e-7■■■□□ 18.6
SF3B3-201ENST00000302516 EML3Q32P44 896 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TSPAN33Q86UF1 283 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SCML4Q8N228 414 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 RPLP0P6Q8NHW5 317 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 S100PBPQ96BU1 408 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TSSK6Q9BXA6 273 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 MEPEQ9NQ76 525 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF726A6NNF4 738 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ARHGEF15O94989 841 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 DBIP07108 87 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SOX9P48436 509 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF81P51508 661 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ARFRP1Q13795 201 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 COL28A1Q2UY09 1125 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CLEC12AQ5QGZ9 265 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM198Q66K66 360 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PNCKQ6P2M8 343 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZDHHC14Q8IZN3 488 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 Q8N402 240 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ATP6V1C2Q8NEY4 427 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 NFKBIDQ8NI38 313 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PBDC1Q9BVG4 233 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 FANCFQ9NPI8 374 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZFP57Q9NU63 452 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TAS2R3Q9NYW6 316 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IL36AQ9UHA7 158 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 LAMP5Q9UJQ1 280 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PCDHGA2Q9Y5H1 932 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CPQQ9Y646 472 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IGKV6D-41A0A0C4DH26 115 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 PRSS51A0A1B0GVH4 220 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 GRXCR2A6NFK2 248 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 FAM170BA6NMN3 283 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 RASGRP1O95267 797 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ATP1B2P14415 290 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 HTR1EP28566 365 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 CD40LGP29965 261 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SDHAF4Q5VUM1 108 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 FUT10Q6P4F1 479 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms