RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IER5LQ5T953 404 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 OR5AK3PQ8NH89 298 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 CXorf40AQ8TE69 158 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 UTP15Q8TED0 518 aaKnown RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 NFKBIL1Q9UBC1 381 aaPredicted RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 PRKAB1Q9Y478 270 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 J3QRK9 145 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 PSMD11O00231 422 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ADAMDEC1O15204 470 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 CLPXO76031 633 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 CYP17A1P05093 508 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SERPINB10P48595 397 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 CCR3P51677 355 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 EMP3P54852 163 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 NR1D2Q14995 579 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 SUSD6Q92537 303 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SMG7Q92540 1137 aaKnown RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 RAD51AP1Q96B01 352 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 IMPAD1Q9NX62 359 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SH3GLB1Q9Y371 365 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 PIPSLA2A3N6 862 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ANKRD33BA6NCL7 494 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ANKDD1BA6NHY2 528 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 M0QX08 132 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 DNAJB5O75953 348 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 C6P13671 934 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ITIH1P19827 911 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 VIPR2P41587 438 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 MAP2K4P45985 399 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 EPHA5P54756 1037 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 RPP38P78345 283 aaKnown RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 ATP1A4Q13733 1029 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 KEAP1Q14145 624 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 IFI44LQ53G44 452 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 PLEKHA8Q96JA3 519 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
CDH8-201ENST00000299345 BHLHE41Q9C0J9 482 aaPredicted RBP13.09□□□□□ -0.31
CDH8-201ENST00000299345 BCAS1O75363 584 aaPredicted RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 KRT75O95678 551 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 CDH12P55289 794 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ITGA1P56199 1179 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 CYP4F2P78329 520 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 MC1RQ01726 317 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 NPRL3Q12980 569 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ITGADQ13349 1161 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 GAB1Q13480 694 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 SCARB2Q14108 478 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ADCK2Q7Z695 626 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 TSPYL5Q86VY4 417 aaPredicted RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 ZFP90Q8TF47 636 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 IL17FQ96PD4 163 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 RAD9AQ99638 391 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 TRIM39Q9HCM9 518 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 DPP7Q9UHL4 492 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 TSPAN11A1L157 253 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 YY2O15391 372 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 SERPIND1P05546 499 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 HNRNPA1P09651 372 aaKnown RBP eCLIP13.08□□□□□ -0.328e-7■□□□□ 10.5
CDH8-201ENST00000299345 TFPTP0C1Z6 253 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 NPPBP16860 134 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ALDH4A1P30038 563 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 OR1E2P47887 323 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 NFE2L1Q14494 772 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 PRAMEF13Q5VWM6 474 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 TMIGD1Q6UXZ0 262 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 MUL1Q969V5 352 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 GPN2Q9H9Y4 310 aaPredicted RBP13.08□□□□□ -0.32
CDH8-201ENST00000299345 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 TMEM98Q9Y2Y6 226 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 K7ESM1 405 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 MAGEB3O15480 346 aa13.08□□□□□ -0.32
CDH8-201ENST00000299345 ITGA2P17301 1181 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms