RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 HIST1H2AGP0C0S8 130 aaPredicted RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 H2AFB1P0C5Y9 115 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 H2AFB2P0C5Z0 115 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 MYZAPP0CAP1 466 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CDK4P11802 303 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 GFAPP14136 432 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TSPAN8P19075 237 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 HIST1H2ADP20671 130 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ITGAXP20702 1163 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ATP5F1P24539 256 aaPredicted RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 ALDH3A1P30838 453 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 BCL6P41182 706 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CCT5P48643 541 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 PRKAA2P54646 552 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CDH13P55290 713 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 DNAJB13P59910 316 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 HERVK_113P63132 956 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 HSD11B2P80365 405 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 REEP5Q00765 189 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ID3Q02535 119 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CYP4F3Q08477 520 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CDC16Q13042 620 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TRAF3Q13114 568 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 PRKAA1Q13131 559 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 GTF2H2Q13888 395 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SF1Q15637 639 aaKnown RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 PDK4Q16654 411 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CCDC153Q494R4 210 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ZNF678Q5SXM1 525 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 PRAMEF17Q5VTA0 474 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 FRMPD2BQ6IN97 320 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CAPN13Q6MZZ7 669 aaPredicted RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 GTF2H2CQ6P1K8 395 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 FDX2Q6P4F2 183 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 KLHL35Q6PF15 583 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 LRRC70Q7Z2Q7 622 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 VN1R4Q7Z5H5 301 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 C17orf64Q86WR6 236 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 C10orf107Q8IVU9 208 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 OR4N4Q8N0Y3 316 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 LSMEM2Q8N112 164 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CNPY4Q8N129 248 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CARFQ8N187 725 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TCAIMQ8N3R3 496 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TEX9Q8N6V9 391 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SNX31Q8N9S9 440 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ANKRD53Q8N9V6 530 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 OR52B6Q8NGF0 335 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 OR1L3Q8NH93 324 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SLC5A11Q8WWX8 675 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ATL1Q8WXF7 558 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 L3HYPDHQ96EM0 354 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 WDR34Q96EX3 536 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 HIST1H2AHQ96KK5 128 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ATP6V1G3Q96LB4 118 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ZNF285Q96NJ3 590 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 PRAP1Q96NZ9 151 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 FANCD2OSQ96PS1 177 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SMC6Q96SB8 1091 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 HIST1H2AJQ99878 128 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 H2AFJQ9BTM1 129 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SCNM1Q9BWG6 230 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 GATA5Q9BWX5 397 aaPredicted RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 ERVK-6Q9BXR3 956 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TRIM54Q9BYV2 358 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 CHRNA10Q9GZZ6 450 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 PELI2Q9HAT8 420 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 MLXIPLQ9NP71 852 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 MRPS30Q9NP92 439 aaKnown RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 ASCL3Q9NQ33 180 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 TPSG1Q9NRR2 321 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 DNAJC11Q9NVH1 559 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 OXSMQ9NWU1 459 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 GEMIN8Q9NWZ8 242 aaKnown RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 FOXJ2Q9P0K8 574 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 SENP1Q9P0U3 644 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 COPG2Q9UBF2 871 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 ZNF490Q9ULM2 529 aaPredicted RBP5.64□□□□□ -1.51
SSX3-201ENST00000298396 SATB2Q9UPW6 733 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 LOXL2Q9Y4K0 774 aa5.64□□□□□ -1.51
SSX3-201ENST00000298396 LOC400499M0QZD8 3231 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 DSPP15924 2871 aaKnown RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 CNTRLQ7Z7A1 2325 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MGAQ8IWI9 3026 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 CDRT15L2A8MXV6 281 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 B4E171 279 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 TMEM150CB9EJG8 249 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 PLD2O14939 933 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 ZW10O43264 779 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 KDM1AO60341 852 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 SMIM24O75264 130 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 CCNDBP1O95273 360 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 FKBP9O95302 570 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 S100BP04271 92 aaPredicted RBP5.63□□□□□ -1.51
SSX3-201ENST00000298396 BPGMP07738 259 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 C1GALT1C1LP0DN25 315 aa5.63□□□□□ -1.51
SSX3-201ENST00000298396 MYL2P10916 166 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms