RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 COMMD4Q9H0A8 199 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 WDR45Q9Y484 360 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 GSTM3P21266 225 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF41P51814 821 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 ABHD18Q0P651 414 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 PCBP2Q15366 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 SYT16Q17RD7 645 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 C10orf82Q8WW14 230 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 BTBD3Q9Y2F9 522 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 OAS3Q9Y6K5 1087 aaKnown RBP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 TRBC2A0A5B9 178 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 AHSA1O95433 338 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 JUPP14923 745 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 PPP3R1P63098 170 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 RIPK1Q13546 671 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 CYS1Q717R9 158 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 CHCHD4Q8N4Q1 142 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 C11orf16Q9NQ32 467 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 TNFRSF21O75509 655 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ACVR2AP27037 513 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 MRPS21P82921 87 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ELOAQ14241 798 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 CBARPQ8N350 705 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 HHIPQ96QV1 700 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 TVP23BQ9NYZ1 205 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 POMPQ9Y244 141 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 A0A1W2PP18 115 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 TPD52L2O43399 206 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 MATN1P21941 496 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 CDKN1CP49918 316 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 GALK1P51570 392 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 UFM1P61960 85 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 GRM7Q14831 915 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 B3GNT6Q6ZMB0 384 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF433Q8N7K0 673 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR52E4Q8NGH9 312 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 PNPLA2Q96AD5 504 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 KHNYNO15037 678 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 EDN1P05305 212 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 H1F0P07305 194 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 HBQ1P09105 142 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 GNALP38405 381 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 AGTR2P50052 363 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 SPANXN4Q5MJ08 99 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 PIGWQ7Z7B1 504 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 LRTOMTQ8WZ04 291 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 DKKL1Q9UK85 242 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 MAN2B2Q9Y2E5 1009 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 E7ESA3 106 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 M0QX08 132 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 SERPINA3P01011 423 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ERVFC1P60507 584 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ID2Q02363 134 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 CCNIQ14094 377 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 MAPK14Q16539 360 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 TCTE1Q5JU00 501 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMEM214Q6NUQ4 689 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 IL17FQ96PD4 163 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
CDC42EP3-201ENST00000295324 ADAM12O43184 909 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 ENDOUP21128 410 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 XKP51811 444 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 ST3GAL3Q11203 375 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 PCLAFQ15004 111 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 PTCRAQ6ISU1 281 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 VN1R2Q8NFZ6 395 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR6K6Q8NGW6 343 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 MTG2Q9H4K7 406 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 MARCH4Q9P2E8 410 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 DNMT3BQ9UBC3 853 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 HCSTQ9UBK5 93 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 UBE2QL1A1L167 161 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SHOX2O60902 331 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SDC3O75056 442 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 RCBTB2O95199 551 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 C6orf47O95873 294 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 GGT5P36269 586 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 LIN54Q6MZP7 749 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 DCP2Q8IU60 420 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR10G2Q8NGC3 310 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 RIMKLBQ9ULI2 386 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 WASH4PA8MWX3 477 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SLC30A4O14863 429 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 CYP17A1P05093 508 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMEM35AQ53FP2 167 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 KLHL22Q53GT1 634 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 RANBP10Q6VN20 620 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 ADAMTS18Q8TE60 1221 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 NR4A3Q92570 626 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 NXPE3Q969Y0 559 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms