RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PRICKLE3O43900 615 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 CPSF4O95639 269 aaKnown RBP8.78□□□□□ -1
PDPN-201ENST00000294489 ACP5P13686 325 aa8.78□□□□□ -1
PDPN-201ENST00000294489 PTX3P26022 381 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 PKLRP30613 574 aa8.78□□□□□ -1
PDPN-201ENST00000294489 RPL3P39023 403 aaKnown RBP8.78□□□□□ -1
PDPN-201ENST00000294489 MEF2AQ02078 507 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 TFF2Q03403 129 aa8.78□□□□□ -1
PDPN-201ENST00000294489 GAS6Q14393 721 aa8.78□□□□□ -1
PDPN-201ENST00000294489 CAMKMTQ7Z624 323 aa8.78□□□□□ -1
PDPN-201ENST00000294489 FAM124AQ86V42 546 aa8.78□□□□□ -1
PDPN-201ENST00000294489 C2orf73Q8N5S3 287 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 MFSD2AQ8NA29 543 aa8.78□□□□□ -1
PDPN-201ENST00000294489 FBXO30Q8TB52 745 aa8.78□□□□□ -1
PDPN-201ENST00000294489 SMPDL3AQ92484 453 aa8.78□□□□□ -1
PDPN-201ENST00000294489 WDR92Q96MX6 357 aa8.78□□□□□ -1
PDPN-201ENST00000294489 CAMK1GQ96NX5 476 aa8.78□□□□□ -1
PDPN-201ENST00000294489 ACAT2Q9BWD1 397 aa8.78□□□□□ -1
PDPN-201ENST00000294489 RHBGQ9H310 441 aa8.78□□□□□ -1
PDPN-201ENST00000294489 WSB2Q9NYS7 404 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 UBAP1Q9NZ09 502 aa8.78□□□□□ -1
PDPN-201ENST00000294489 SH3BP4Q9P0V3 963 aa8.78□□□□□ -1
PDPN-201ENST00000294489 PNMA8BQ9ULN7 279 aaPredicted RBP8.78□□□□□ -1
PDPN-201ENST00000294489 DMTF1Q9Y222 760 aa8.78□□□□□ -1
PDPN-201ENST00000294489 PLEKHM1Q9Y4G2 1056 aa8.78□□□□□ -1
PDPN-201ENST00000294489 FANCMQ8IYD8 2048 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 EYSQ5T1H1 3165 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 GABRR3A8MPY1 467 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 PDLIM1O00151 329 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 SCN2BO60939 215 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 CREG1O75629 220 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 RASAL1O95294 804 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 B3GALT4O96024 378 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 MT-ND1P03886 318 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 LAMP1P11279 417 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 IL9P15248 144 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 ZNF23P17027 643 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 AKT2P31751 481 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 WNT3P56703 355 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 CLDN2P57739 230 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 RBBP5Q15291 538 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 KRT80Q6KB66 452 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 COMMD6Q7Z4G1 85 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 R3HCC1LQ7Z5L2 792 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 SPRED1Q7Z699 444 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 SERPINA11Q86U17 422 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 EPHX4Q8IUS5 362 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 OR2L8Q8NGY9 312 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 HMGB4Q8WW32 186 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 FERD3LQ96RJ6 166 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 AIF1LQ9BQI0 150 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 RAB11FIP5Q9BXF6 653 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 OR51B5Q9H339 312 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 KIR3DX1Q9H7L2 352 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 ATAD3AQ9NVI7 634 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 AHSPQ9NZD4 102 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 TAC3Q9UHF0 121 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 BTNL2Q9UIR0 455 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 MOSPD1Q9UJG1 213 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 NDRG2Q9UN36 371 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 DGKBQ9Y6T7 804 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 UNC80Q8N2C7 3258 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 C19orf67A6NJJ6 358 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 PRAMEF26H0Y7S4 382 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 ENGP17813 658 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 IDSP22304 550 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 TXNL4AP83876 142 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 KRT33BQ14525 404 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 RPE65Q16518 533 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 CHERPQ8IWX8 916 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 LINC01555Q8NAE3 123 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 FAM174AQ8TBP5 190 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 SLC47A1Q96FL8 570 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 C12orf66Q96MD2 445 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 LMAN1LQ9HAT1 526 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 LTB4R2Q9NPC1 389 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 DCAF13Q9NV06 445 aaKnown RBP8.77□□□□□ -1.01
PDPN-201ENST00000294489 C2orf42Q9NWW7 574 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 HEBP2Q9Y5Z4 205 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 F5P12259 2224 aa8.77□□□□□ -1.01
PDPN-201ENST00000294489 ANKDD1BA6NHY2 528 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 PPIBP23284 216 aaKnown RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 GZMMP51124 257 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 NHSL2Q5HYW2 709 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ANKRD26P1Q6NSI1 321 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ERICH5Q6P6B1 374 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 FKBP9P1Q75LS8 142 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ADHFE1Q8IWW8 467 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 METTL4Q8N3J2 472 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 ZNF740Q8NDX6 193 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 COQ8BQ96D53 544 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 BHLHE41Q9C0J9 482 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 FAM192AQ9GZU8 254 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 SPNS1Q9H2V7 528 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 REEP4Q9H6H4 257 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 C6orf106Q9H6K1 298 aaPredicted RBP8.76□□□□□ -1.01
PDPN-201ENST00000294489 PCDHGB4Q9UN71 923 aa8.76□□□□□ -1.01
PDPN-201ENST00000294489 CORO2BQ9UQ03 480 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms