RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 TUBB3Q13509 450 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 DOC2AQ14183 400 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 ZNF501Q96CX3 271 aaPredicted RBP12.71□□□□□ -0.37
PSMB4-201ENST00000290541 PKNOX2Q96KN3 472 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 C1QTNF3Q9BXJ4 246 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 FGF21Q9NSA1 209 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 OXSMQ9NWU1 459 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 SLC39A1Q9NY26 324 aa12.71□□□□□ -0.37
PSMB4-201ENST00000290541 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
PSMB4-201ENST00000290541 DCHS2Q6V1P9 2916 aa12.71□□□□□ -0.38
PSMB4-201ENST00000290541 TMEM120BA0PK00 339 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 WDR91A4D1P6 747 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 H0YGG7 62 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 CLGNO14967 610 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 JMJD7P0C870 316 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 C1GALT1C1LP0DN25 315 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 EPB42P16452 691 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ZNF28P17035 718 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 GNAZP19086 355 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 WDR4P57081 412 aaKnown RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ARF3P61204 181 aaPredicted RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 HERVK_113P63132 956 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 SNRPNP63162 240 aaKnown RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 REEP5Q00765 189 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 CHIT1Q13231 466 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 TMTC4Q5T4D3 741 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 CES4AQ5XG92 561 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ATG9BQ674R7 924 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ADNP2Q6IQ32 1131 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 VN1R4Q7Z5H5 301 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 RDH11Q8TC12 318 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 CDK15Q96Q40 435 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 OR2A5Q96R48 311 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 MACROD1Q9BQ69 325 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 GATA5Q9BWX5 397 aaPredicted RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ERVK-6Q9BXR3 956 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 STMN4Q9H169 189 aaPredicted RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 GSTO2Q9H4Y5 243 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 IPPKQ9H8X2 491 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 PELI2Q9HAT8 420 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 SEMA4BQ9NPR2 832 aaPredicted RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 FBXO8Q9NRD0 319 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 GPRC5BQ9NZH0 403 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 FOXJ2Q9P0K8 574 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 AKAP7Q9P0M2 348 aaPredicted RBP12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ZNF225Q9UK10 706 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 PLCL2Q9UPR0 1127 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 ANGPTL3Q9Y5C1 460 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 B3GALT1Q9Y5Z6 326 aa12.7□□□□□ -0.38
PSMB4-201ENST00000290541 POLR1CO15160 346 aaPredicted RBP12.69□□□□□ -0.38
PSMB4-201ENST00000290541 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
PSMB4-201ENST00000290541 P2RX6O15547 441 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 KATNA1O75449 491 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 WFS1O76024 890 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 SUPT7LO94864 414 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 MED26O95402 600 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 BPGMP07738 259 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 DHRS4L1P0CG22 281 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 FGF5P12034 268 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 HRH2P25021 359 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 SERPINB4P48594 390 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 NAGLUP54802 743 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
PSMB4-201ENST00000290541 DNAJB13P59910 316 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ACY1Q03154 408 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 TRAF3Q13114 568 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 TESK1Q15569 626 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 LACTB2Q53H82 288 aaPredicted RBP12.69□□□□□ -0.38
PSMB4-201ENST00000290541 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 SLC22A9Q8IVM8 553 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ANKRD53Q8N9V6 530 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 TRPC4APQ8TEL6 797 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 WDR34Q96EX3 536 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ABHD17AQ96GS6 310 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ZNF285Q96NJ3 590 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 TAAR9Q96RI9 348 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ZFYVE21Q9BQ24 234 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 SELENOSQ9BQE4 189 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 ZNF490Q9ULM2 529 aaPredicted RBP12.69□□□□□ -0.38
PSMB4-201ENST00000290541 RNF11Q9Y3C5 154 aa12.69□□□□□ -0.38
PSMB4-201ENST00000290541 KCNE1BA0A087WTH5 132 aa12.68□□□□□ -0.38
PSMB4-201ENST00000290541 TRBC2A0A5B9 178 aa12.68□□□□□ -0.38
PSMB4-201ENST00000290541 UBFD1O14562 309 aaKnown RBP12.68□□□□□ -0.38
PSMB4-201ENST00000290541 TM9SF1O15321 606 aa12.68□□□□□ -0.38
PSMB4-201ENST00000290541 MAP3K7O43318 606 aa12.68□□□□□ -0.38
PSMB4-201ENST00000290541 HNRNPRO43390 633 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms