RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FAM86B1Q8N7N1 296 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ANKRD53Q8N9V6 530 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OR2A1Q8NGT9 310 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OR2L8Q8NGY9 312 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 FBXO30Q8TB52 745 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 POP5Q969H6 163 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 MTERF3Q96E29 417 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 BMFQ96LC9 184 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CNBD2Q96M20 576 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRAP1Q96NZ9 151 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 BHLHE41Q9C0J9 482 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TTYH1Q9H313 450 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 XKR8Q9H6D3 395 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CD93Q9NPY3 652 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRDM8Q9NQV8 689 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 AASDHPPTQ9NRN7 309 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OLAHQ9NV23 265 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF639Q9UID6 485 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PCDHGB4Q9UN71 923 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PCDHGB5Q9Y5G0 923 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 GMEB1Q9Y692 573 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 FEZF1A0PJY2 475 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRSS38A1L453 326 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OR52A4PA6NMU1 304 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PDZK1P1A8MUH7 402 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 UPK1AO00322 258 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RNASET2O00584 256 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 DEAF1O75398 565 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 SEMA3DO95025 777 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 APBB3O95704 486 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PKLRP30613 574 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 SERPINB1P30740 379 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RPL3P39023 403 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CLCN2P51788 898 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TAS2R50P59544 299 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CSNK1G2P78368 415 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PDE7AQ13946 482 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 GK3PQ14409 553 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 KHDRBS2Q5VWX1 349 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CPZQ66K79 652 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 FKBP9P1Q75LS8 142 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 CHERPQ8IWX8 916 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 GOT1L1Q8NHS2 421 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 OR2M4Q96R27 311 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 F2RL3Q96RI0 385 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RAB11FIP5Q9BXF6 653 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 MS4A8Q9BY19 250 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TPT1P8Q9HAU6 139 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ATAD3AQ9NVI7 634 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 SPASTQ9UBP0 616 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 MMP17Q9ULZ9 603 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RANBP2P49792 3224 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 NUMA1Q14980 2115 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PRAMEF33A0A0G2JMD5 474 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 C1orf226A1L170 272 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 LRRC72A6NJI9 287 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PLPP1O14494 284 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 SCAMP1O15126 338 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PRICKLE3O43900 615 aaPredicted RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 LCMT2O60294 686 aaKnown RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 GPR37L1O60883 481 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 SERPINA1P01009 418 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 GABRG2P18507 467 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PPIBP23284 216 aaKnown RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 TPP2P29144 1249 aaPredicted RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 CCINQ13939 588 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 NFATC4Q14934 902 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 VMACQ2NL98 169 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 CCNYL2Q5T2Q4 361 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 ERICH5Q6P6B1 374 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PTOV1Q86YD1 416 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 APLFQ8IW19 511 aaPredicted RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 ZZZ3Q8IYH5 903 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 OR52E1Q8NGJ3 308 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 ZFP90Q8TF47 636 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 FAM3CQ92520 227 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 TFAP2CQ92754 450 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 NCLNQ969V3 563 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PPCDCQ96CD2 204 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 SLC47A1Q96FL8 570 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 PYURFQ96I23 114 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 VPS50Q96JG6 964 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 WDR92Q96MX6 357 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 SORBS1Q9BX66 1292 aaKnown RBP9.18□□□□□ -0.94
TRIM55-201ENST00000276573 MAGIXQ9H6Y5 334 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 ICKQ9UPZ9 632 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 CA5BQ9Y2D0 317 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 HEBP2Q9Y5Z4 205 aa9.18□□□□□ -0.94
TRIM55-201ENST00000276573 IGKV1-8A0A0C4DH67 115 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TCRBV21S2A2A0A5A6 115 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 TNFRSF10CO14798 259 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 MBTPS2O43462 519 aa9.17□□□□□ -0.94
TRIM55-201ENST00000276573 OR1F1O43749 312 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms