RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TRPS1Q9UHF7 1281 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 C5orf42Q9H799 3197 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 A0A0U1RQF3 1178 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 EIF3FO00303 357 aaPredicted RBP12.45□□□□□ -0.42
COL8A1-202ENST00000273342 F11P03951 625 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 UBE3AQ05086 875 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 CHIT1Q13231 466 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 NFATC2Q13469 925 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
COL8A1-202ENST00000273342 SSX1Q16384 188 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 GPR162Q16538 588 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.45□□□□□ -0.42
COL8A1-202ENST00000273342 CEP78Q5JTW2 689 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 DGKKQ5KSL6 1271 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 PAQR6Q6TCH4 344 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 UBE2R2Q712K3 238 aaPredicted RBP12.45□□□□□ -0.42
COL8A1-202ENST00000273342 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 RBFAQ8N0V3 343 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 LMNTD1Q8N9Z9 388 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 ZFYVE1Q9HBF4 777 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 DNAJC27Q9NZQ0 273 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 SCO2O43819 266 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 TRBC1P01850 177 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 CLEC2LP0C7M8 214 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 IL7P13232 177 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 HNF4AP41235 474 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 HTR2BP41595 481 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 RAB25P57735 213 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 GAB1Q13480 694 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 NXF2Q9GZY0 626 aaKnown RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 SLC32A1Q9H598 525 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 TMEM39AQ9NV64 488 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 ANKRD36A6QL64 1941 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 ERVH48-1M5A8F1 160 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 TSC22D2O75157 780 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 HOXB9P17482 250 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 AMD1P17707 334 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 WNT3P56703 355 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 PTGES3Q15185 160 aaKnown RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 NFE2Q16621 373 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 RSPO2Q6UXX9 243 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 VRK3Q8IV63 474 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 PIK3R3Q92569 461 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 DYRK4Q9NR20 520 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 TOR4AQ9NXH8 423 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 CCDC59Q9P031 241 aaKnown RBP12.44□□□□□ -0.42
COL8A1-202ENST00000273342 CFL2Q9Y281 166 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 PCDHB1Q9Y5F3 818 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 PATJQ8NI35 1801 aa12.44□□□□□ -0.42
COL8A1-202ENST00000273342 TRAV19A0A0A6YYK7 116 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ZSCAN5BA6NJL1 495 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GAPDHSO14556 408 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CAPN5O15484 640 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CD160O95971 181 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PRPS2P11908 318 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CNR2P34972 360 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 HMGCLP35914 325 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CAV3P56539 151 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ZNF79Q15937 498 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 TTLL9Q3SXZ7 439 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ASB15Q8WXK1 588 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SNX18Q96RF0 628 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ZNF556Q9HAH1 456 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 OLA1Q9NTK5 396 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CD84Q9UIB8 345 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 AP3M1Q9Y2T2 418 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PCDHGA2Q9Y5H1 932 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PRAMEF25A6NGN4 478 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 H3BNC9 293 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SAP18O00422 153 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 KPNA5O15131 536 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 AKR7A2O43488 359 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 TMCC2O75069 709 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GCM2O75603 506 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SEMG1P04279 462 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GPX2P18283 190 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 IL1RNP18510 177 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ITGALP20701 1170 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CYP2A7P20853 494 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CCDC85BQ15834 202 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GPRC6AQ5T6X5 926 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 LIPKQ5VXJ0 399 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 ALG1LQ6GMV1 187 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 WDR53Q7Z5U6 358 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CELF5Q8N6W0 485 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 JPH3Q8WXH2 748 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 C8orf48Q96LL4 319 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PARK7Q99497 189 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms