RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MS4A8Q9BY19 250 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 ZNF717Q9BY31 904 aaPredicted RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 UGT2B28Q9BY64 529 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 BHLHE41Q9C0J9 482 aaPredicted RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 XKR8Q9H6D3 395 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 MVB12BQ9H7P6 319 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 DCAF13Q9NV06 445 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 ZNF639Q9UID6 485 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 MMP17Q9ULZ9 603 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 CA5BQ9Y2D0 317 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 PCDHB11Q9Y5F2 797 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 IGKV1-8A0A0C4DH67 115 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 TCRBV21S2A2A0A5A6 115 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PDZK1P1A8MUH7 402 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 H0Y8X5 98 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 NARSO43776 548 aaKnown RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SEMA3DO95025 777 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PRSS23O95084 383 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 KLK1P06870 262 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 GABRG2P18507 467 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 EFNA1P20827 205 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 GK3PQ14409 553 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 RPE65Q16518 533 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 NHSL2Q5HYW2 709 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 TMTC4Q5T4D3 741 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 DEPDC1Q5TB30 811 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 OR52E1Q8NGJ3 308 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 OR2A1Q8NGT9 310 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 FBXO30Q8TB52 745 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 NETO1Q8TDF5 533 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 OR1E3Q8WZA6 343 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PDXPQ96GD0 296 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 RAB11FIP5Q9BXF6 653 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 NTN4Q9HB63 628 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 C8orf4Q9NR00 106 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 OLAHQ9NV23 265 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SH3BP4Q9P0V3 963 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SCHIP1Q9P0W5 487 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 ICKQ9UPZ9 632 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 UPK1AO00322 258 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PLPP1O14494 284 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SCAMP1O15126 338 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 RASAL1O95294 804 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 ASGR2P07307 311 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 IL1RNP18510 177 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 TPP2P29144 1249 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SERPINB1P30740 379 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 CSNK1G2P78368 415 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 MC1RQ01726 317 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 CHRNB3Q05901 458 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PRDX1Q06830 199 aaKnown RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 LRRC74AQ0VAA2 488 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 KHDRBS2Q5VWX1 349 aaKnown RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SNX19Q92543 992 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 CNBD2Q96M20 576 aa15.93■□□□□ 0.14
CCDC40-201ENST00000269318 SORBS1Q9BX66 1292 aaKnown RBP15.93■□□□□ 0.14
CCDC40-201ENST00000269318 PRAMEF33A0A0G2JMD5 474 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 FEZF1A0PJY2 475 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 ANKDD1BA6NHY2 528 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 CLOCKO15516 846 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 PRICKLE3O43900 615 aaPredicted RBP15.92■□□□□ 0.14
CCDC40-201ENST00000269318 PRKD3O94806 890 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 KCNK5O95279 499 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 HNRNPA2B1P22626 353 aaKnown RBP15.92■□□□□ 0.14
CCDC40-201ENST00000269318 TAS2R50P59544 299 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 TXNL4AP83876 142 aaKnown RBP15.92■□□□□ 0.14
CCDC40-201ENST00000269318 TFF2Q03403 129 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 GAB1Q13480 694 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 MPEG1Q2M385 716 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 CPZQ66K79 652 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 IKBIPQ70UQ0 350 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 R3HCC1LQ7Z5L2 792 aaKnown RBP15.92■□□□□ 0.14
CCDC40-201ENST00000269318 CARM1Q86X55 608 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 PTOV1Q86YD1 416 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 ZZZ3Q8IYH5 903 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
CCDC40-201ENST00000269318 FAM3CQ92520 227 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 NCLNQ969V3 563 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 CHST8Q9H2A9 424 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 TPT1P8Q9HAU6 139 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 AASDHPPTQ9NRN7 309 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 PDP2Q9P2J9 529 aa15.92■□□□□ 0.14
CCDC40-201ENST00000269318 MBTPS2O43462 519 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 CD72P21854 359 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 RPL3P39023 403 aaKnown RBP15.91■□□□□ 0.14
CCDC40-201ENST00000269318 CYP4F2P78329 520 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 C2orf80Q0P641 193 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ADRM1Q16186 407 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ENPP7Q6UWV6 458 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 PGBD3Q8N328 593 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ZFP90Q8TF47 636 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 MTERF3Q96E29 417 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 WDR92Q96MX6 357 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 BDH2Q9BUT1 245 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 ATAD3AQ9NVI7 634 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 AHSPQ9NZD4 102 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 TBC1D29Q9UFV1 150 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 EBF1Q9UH73 591 aa15.91■□□□□ 0.14
CCDC40-201ENST00000269318 PNMA8BQ9ULN7 279 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms