RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TCF25Q9BQ70 676 aa16.27■□□□□ 0.2
RTN1-201ENST00000267484 GNG14A0A1W2PPG7 69 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 PCDH17O14917 1159 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 ASNA1O43681 348 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 BMPR1AP36894 532 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 TUBA1BP68363 451 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 RAE1P78406 368 aaKnown RBP16.27■□□□□ 0.19
RTN1-201ENST00000267484 DMC1Q14565 340 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 SLC8B1Q6J4K2 584 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 TUBA1AQ71U36 451 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 LACC1Q8IV20 430 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 FAM9CQ8IZT9 166 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 OR8J2Q8NGG1 315 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 OR4A15Q8NGL6 344 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 AUTS2Q8WXX7 1259 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 VOPP1Q96AW1 172 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 CHST8Q9H2A9 424 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 TRIM39Q9HCM9 518 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 YIPF1Q9Y548 306 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 MYOFQ9NZM1 2061 aa16.27■□□□□ 0.19
RTN1-201ENST00000267484 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 SCAMP2O15127 329 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 CBSLP0DN79 551 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 SERPINA4P29622 427 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 CBSP35520 551 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 RGS6P49758 472 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 ZNF181Q2M3W8 571 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 IER5LQ5T953 404 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 METTL2BQ6P1Q9 378 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 TCAIMQ8N3R3 496 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 CTRCQ99895 268 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 HOXD1Q9GZZ0 328 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 CCDC88CQ9P219 2028 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 DUSP12Q9UNI6 340 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 PCDHGA2Q9Y5H1 932 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 C1orf226A1L170 272 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 KMOO15229 486 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 NUAK1O60285 661 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 GREM1O60565 184 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 ARHGEF15O94989 841 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 POU1F1P28069 291 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 UGT2B10P36537 528 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 CASP3P42574 277 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 CCL23P55773 120 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 MC1RQ01726 317 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 B3GNT7Q8NFL0 401 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 C2orf15Q8WU43 125 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 TXNDC15Q96J42 360 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 SGK2Q9HBY8 427 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 IFT52Q9Y366 437 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 AGAP14A8MT82 685 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 AP3D1O14617 1153 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 KIAA0513O60268 411 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 C8GP07360 202 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 PREPP48147 710 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 COPZ1P61923 177 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 VEZF1Q14119 521 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 TSTQ16762 297 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 DNAJB7Q7Z6W7 309 aaPredicted RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 THOC6Q86W42 341 aaKnown RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 NFKBIDQ8NI38 313 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 WDR20Q8TBZ3 569 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 TP63Q9H3D4 680 aaPredicted RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 ZNF334Q9HCZ1 680 aaPredicted RBP16.26■□□□□ 0.19
RTN1-201ENST00000267484 IMPAD1Q9NX62 359 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 PCDHGB6Q9Y5F9 930 aa16.26■□□□□ 0.19
RTN1-201ENST00000267484 A8MV72 311 aaPredicted RBP16.25■□□□□ 0.19
RTN1-201ENST00000267484 E9PQ18 207 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 IGSF6O95976 241 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 C1SP09871 688 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 HOXB6P17509 224 aaKnown RBP16.25■□□□□ 0.19
RTN1-201ENST00000267484 C10orf62Q5T681 223 aaPredicted RBP16.25■□□□□ 0.19
RTN1-201ENST00000267484 ZNF783Q6ZMS7 281 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 TPRG1Q6ZUI0 275 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 OTOP2Q7RTS6 562 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 BBS7Q8IWZ6 715 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 NPAS3Q8IXF0 933 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 FAM217AQ8IXS0 508 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 FCGR1BQ92637 280 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 CIDECQ96AQ7 238 aaPredicted RBP16.25■□□□□ 0.19
RTN1-201ENST00000267484 BRD9Q9H8M2 597 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 CFAP20Q9Y6A4 193 aaKnown RBP16.25■□□□□ 0.19
RTN1-201ENST00000267484 ISPDA4D126 451 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 TTC36A6NLP5 189 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 TAF4O00268 1085 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 SLC10A3P09131 477 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 CYP2A7P20853 494 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 SELENOWP63302 87 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 HBA1P69905 142 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 CYP4F8P98187 520 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 MADCAM1Q13477 382 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 PNCKQ6P2M8 343 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 OR2AP1Q8NGE2 309 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 OR4K3Q96R72 315 aa16.25■□□□□ 0.19
RTN1-201ENST00000267484 EHD3Q9NZN3 535 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms