RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 XKR6Q5GH73 641 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 LRRC73Q5JTD7 316 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 ADNP2Q6IQ32 1131 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
BEST3-201ENST00000266661 TRIM74Q86UV6 250 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 HORMAD1Q86X24 394 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 MINDY2Q8NBR6 621 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 ZNF540Q8NDQ6 660 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 OR56A3Q8NH54 315 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 GOT1L1Q8NHS2 421 aaPredicted RBP11.99□□□□□ -0.49
BEST3-201ENST00000266661 ASZ1Q8WWH4 475 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 STARD8Q92502 1023 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 SCAMP4Q969E2 229 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 LGALS12Q96DT0 336 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 ZNF558Q96NG5 402 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 ZDHHC6Q9H6R6 413 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 STOX2Q9P2F5 926 aaPredicted RBP11.99□□□□□ -0.49
BEST3-201ENST00000266661 FZD4Q9ULV1 537 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 RNF6Q9Y252 685 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 INSL6Q9Y581 213 aa11.99□□□□□ -0.49
BEST3-201ENST00000266661 SLC5A10A0PJK1 596 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 TSPAN11A1L157 253 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PRAMEF25A6NGN4 478 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 EPOPA6NHQ4 379 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 M0R082 166 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 TEX28O15482 410 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 FAM20BO75063 409 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 TNFRSF21O75509 655 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 FADS2O95864 444 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 LCKP06239 509 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 CKMP06732 381 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 ZNF30P17039 623 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PPIBP23284 216 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 ALDH4A1P30038 563 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 UGT2B10P36537 528 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 ACSM2AQ08AH3 577 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 CAMK2GQ13555 558 aaPredicted RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 LRIT3Q3SXY7 679 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 CCSMST1Q4G0I0 132 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 ACSM2BQ68CK6 577 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 AGTRAPQ6RW13 159 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 GDPD4Q6W3E5 623 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 Q7L0L9 218 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 ATG16L2Q8NAA4 619 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 OR2A12Q8NGT7 310 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 ELMO1Q92556 727 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 MRPS31Q92665 395 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 RPL3LQ92901 407 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 CLP1Q92989 425 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 MTERF1Q99551 399 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 DOHHQ9BU89 302 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 FAM83DQ9H4H8 585 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 NDUFAF4Q9P032 175 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 ATP6V1HQ9UI12 483 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PSORS1C1Q9UIG5 152 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PCDHGB3Q9Y5G1 929 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 LYVE1Q9Y5Y7 322 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PLXNA2O75051 1894 aa11.98□□□□□ -0.49
BEST3-201ENST00000266661 PRRC2BQ5JSZ5 2229 aaKnown RBP11.98□□□□□ -0.49
BEST3-201ENST00000266661 FADS2P1A8MWK0 482 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 M0R3G1 203 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 GRM6O15303 877 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 PCDH7O60245 1069 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 RFPL2O75678 378 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 KLHL18O94889 574 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 URODP06132 367 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 GABRB1P18505 474 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 PSMB9P28065 219 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 VIPR1P32241 457 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 GGT2P36268 569 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 ASMTP46597 345 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 LSM3P62310 102 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 TEKQ02763 1124 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 EEF1A2Q05639 463 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 INAQ16352 499 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TRIM16LQ309B1 348 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 ZNF385BQ569K4 471 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 PRSS36Q5K4E3 855 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SPOUT1Q5T280 376 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 TMEM236Q5W0B7 351 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 GPR65Q8IYL9 337 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 NAGSQ8N159 534 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 C1orf52Q8N6N3 182 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 OR7G3Q8NG95 312 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 GLMNQ92990 594 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TAMM41Q96BW9 452 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TTYH1Q9H313 450 aaPredicted RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 ANKHQ9HCJ1 492 aa11.97□□□□□ -0.49
BEST3-201ENST00000266661 TRNAU1APQ9NX07 287 aaKnown RBP11.97□□□□□ -0.49
BEST3-201ENST00000266661 MAPRE3Q9UPY8 281 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms