RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 OPN1SWP03999 348 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 LCKP06239 509 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 HOXA9P31269 272 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 TEAD2Q15562 447 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 FNDC3BQ53EP0 1204 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 TMEM240Q5SV17 173 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 DCST1Q5T197 706 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 DESI1Q6ICB0 168 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 KIAA1324Q6UXG2 1013 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 RSPO2Q6UXX9 243 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 RANBP10Q6VN20 620 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 BHLHA9Q7RTU4 235 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 TEX47Q8TBZ9 253 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 ASZ1Q8WWH4 475 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 ERVK13-1Q9NX77 482 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 GULP1Q9UBP9 304 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 TRIP11Q15643 1979 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 TSPAN4O14817 238 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 IGLV3-27P01718 113 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 NR2F1P10589 423 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 HMGA1P17096 107 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 SHMT2P34897 504 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 PTGS2P35354 604 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 SEMG2Q02383 582 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 STX4Q12846 297 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 OR6Q1Q8NGQ2 317 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 PTERQ96BW5 349 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 CNDP2Q96KP4 475 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 NKIRAS2Q9NYR9 191 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 CD300AQ9UGN4 299 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 HSPE1-MOB4S4R3N1 261 aa11.16□□□□□ -0.62
CLSTN3-201ENST00000266546 PRAMEF33A0A0G2JMD5 474 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 C1QTNF3-AMACRE9PGA6 284 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 PGRMC2O15173 223 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 PRAMEF10O60809 474 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 SOCS5O75159 536 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 F11P03951 625 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 CD247P20963 164 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 GRSF1Q12849 480 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 OR52B6Q8NGF0 335 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 BCL7CQ8WUZ0 217 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 ZNF607Q96SK3 696 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 ASPNQ9BXN1 380 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 SFXN1Q9H9B4 322 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 ARNT2Q9HBZ2 717 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 GRIP1Q9Y3R0 1128 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 IRGMA1A4Y4 181 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 LOC730098B7Z3J9 87 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 UGT2B17O75795 530 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 FDXRP22570 491 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 HTR1BP28222 390 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 NOS3P29474 1203 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 NPRL3Q12980 569 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 AGAP7PQ5VUJ5 663 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 PNCKQ6P2M8 343 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 OR2AP1Q8NGE2 309 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 BTN2A2Q8WVV5 523 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 ISL2Q96A47 359 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 ABCB8Q9NUT2 735 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 CDH7Q9ULB5 785 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 FZD4Q9ULV1 537 aa11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 RUVBL1Q9Y265 456 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 RPL36Q9Y3U8 105 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-201ENST00000266546 I3L521 148 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 FSHRP23945 695 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 MYL9P24844 172 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 GABRB3P28472 473 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 STAT5AP42229 794 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 DGKGP49619 791 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 CASP9P55211 416 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 E2F2Q14209 437 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 PDGFRLQ15198 375 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 GET4Q7L5D6 327 aaPredicted RBP11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 TSPYL5Q86VY4 417 aaPredicted RBP11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 CDK20Q8IZL9 346 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 RHOXF1Q8NHV9 184 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 FIBINQ8TAL6 211 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 BBS4Q96RK4 519 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 MTERF1Q99551 399 aaKnown RBP11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 PCDHGB6Q9Y5F9 930 aa11.15□□□□□ -0.63
CLSTN3-201ENST00000266546 ALPLP05186 524 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms