RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 REEP3Q6NUK4 255 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 NUP54Q7Z3B4 507 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 SLC9B2Q86UD5 537 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 PNPLA1Q8N8W4 532 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 C9orf43Q8TAL5 461 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 RAB8BQ92930 207 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 KLHDC7BQ96G42 594 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 JSRP1Q96MG2 331 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 GPER1Q99527 375 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 TM9SF3Q9HD45 589 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 RIMKLBQ9ULI2 386 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 DHFRP00374 187 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 SRCP12931 536 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 NUDT6P53370 316 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 FBXO46Q6PJ61 603 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 KDELC1Q6UW63 502 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 AQP11Q8NBQ7 271 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 LMX1AQ8TE12 382 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 FUBP1Q96AE4 644 aaKnown RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 UCK2Q9BZX2 261 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 SLC2A4RGQ9NR83 387 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 NFKBIL1Q9UBC1 381 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
CDH3-201ENST00000264012 A0A096LPI6 279 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 JUPP14923 745 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MAGEA6P43360 314 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TM4SF4P48230 202 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TBPL1P62380 186 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SH3BP2P78314 561 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 PPP2R2BQ00005 443 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 DOC2AQ14183 400 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MYBPC3Q14896 1274 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 BICRALQ6AI39 1079 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CRTC1Q6UUV9 634 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MCEMP1Q8IX19 187 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SCML4Q8N228 414 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CHCHD4Q8N4Q1 142 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CHST14Q8NCH0 376 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SLC7A6OSQ96CW6 309 aaPredicted RBP13.51□□□□□ -0.25
CDH3-201ENST00000264012 OMA1Q96E52 524 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ALPK1Q96QP1 1244 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 PDCD10Q9BUL8 212 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TRIM39Q9HCM9 518 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 Q9N2J8 555 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 AURKAO14965 403 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 C6P13671 934 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ACADLP28330 430 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDH3-201ENST00000264012 FAUP35544 74 aaKnown RBP13.51□□□□□ -0.25
CDH3-201ENST00000264012 HYAL2Q12891 473 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CBX3Q13185 183 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ENPP2Q13822 863 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ATG9BQ674R7 924 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ZCCHC12Q6PEW1 402 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 KLHDC10Q6PID8 442 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ARMCX6Q7L4S7 300 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 NANOGNBQ7Z5D8 188 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ERI1Q8IV48 349 aaKnown RBP13.51□□□□□ -0.25
CDH3-201ENST00000264012 LINC00471Q8N535 108 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 IL17FQ96PD4 163 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MAPKAP1Q9BPZ7 522 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SNTG1Q9NSN8 517 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 FAM170BA6NMN3 283 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 G3V2L1 256 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TIMP1P01033 207 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 HSD3B1P14060 373 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 MATN1P21941 496 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 HSD3B2P26439 372 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ACVR2AP27037 513 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDH3-201ENST00000264012 ARRB1P49407 418 aaPredicted RBP13.51□□□□□ -0.25
CDH3-201ENST00000264012 NRG3P56975 720 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ST3GAL3Q11203 375 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 GRIK2Q13002 908 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TCEAL5Q5H9L2 206 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ARHGAP12Q8IWW6 846 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SLC15A3Q8IY34 581 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SLC39A11Q8N1S5 342 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 CASD1Q96PB1 797 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TBX5Q99593 518 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 SCN1BQ07699 218 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 C5orf22Q49AR2 442 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 GHDCQ8N2G8 530 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 ZNF527Q8NB42 609 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 NDC1Q9BTX1 674 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TOR3AQ9H497 397 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 TRPV5Q9NQA5 729 aa13.51□□□□□ -0.25
CDH3-201ENST00000264012 HRASLS2Q9NWW9 162 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms