RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.47■□□□□ 0.39
SDF4-201ENST00000263741 SLC13A3Q8WWT9 602 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 EFCAB11Q9BUY7 163 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 PRM3Q9NNZ6 103 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 ACSL6Q9UKU0 697 aa17.47■□□□□ 0.39
SDF4-201ENST00000263741 KCNE1BA0A087WTH5 132 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 WDR91A4D1P6 747 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 FFAR3O14843 346 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 GPR42O15529 346 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SH3BGRLO75368 114 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 B3GALT4O96024 378 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 LIPCP11150 499 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 PCNAP12004 261 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 RORAP35398 523 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 FOXK2Q01167 660 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 CLN3Q13286 438 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 DDX39BQ13838 428 aaKnown RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 GRHL2Q6ISB3 625 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 LETMD1Q6P1Q0 360 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 C6orf15Q6UXA7 325 aaPredicted RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 PRSS41Q7RTY9 318 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 DTX1Q86Y01 620 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 KRT78Q8N1N4 520 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 OR4F6Q8NGB9 312 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SNIP1Q8TAD8 396 aaKnown RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 DYDC1Q8WWB3 177 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SARGQ9BW04 601 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SHCBP1LQ9BZQ2 653 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 B3GNT4Q9C0J1 378 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 TXLNGQ9NUQ3 528 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 ZFP69BQ9UJL9 534 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 ZNF225Q9UK10 706 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 ACTL7BQ9Y614 415 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 TMEM120BA0PK00 339 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 FITM1A5D6W6 292 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 ITGAXP20702 1163 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 FOXL2P58012 376 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 TBCCQ15814 346 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 LIPMQ5VYY2 423 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 METTL2BQ6P1Q9 378 aaKnown RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 NLGN4XQ8N0W4 816 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SHISA5Q8N114 240 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 ARHGEF39Q8N4T4 335 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 TBC1D19Q8N5T2 526 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 NLGN4YQ8NFZ3 816 aaPredicted RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 MGARPQ8TDB4 240 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 KCNE4Q8WWG9 221 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 MR1Q95460 341 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 NKD1Q969G9 470 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 TM4SF19Q96DZ7 209 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 CCDC126Q96EE4 140 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 CNTNAP3BQ96NU0 1288 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 CNTNAP3Q9BZ76 1288 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 AICDAQ9GZX7 198 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 SSU72Q9NP77 194 aaKnown RBP17.46■□□□□ 0.39
SDF4-201ENST00000263741 MID2Q9UJV3 735 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 AP1M2Q9Y6Q5 423 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 MAU2Q9Y6X3 613 aa17.46■□□□□ 0.39
SDF4-201ENST00000263741 CCT8L1PA6NM43 557 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 C4orf51C9J302 202 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.45■□□□□ 0.38
SDF4-201ENST00000263741 MEN1O00255 615 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 PRPF4O43172 522 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■□□□□ 10.2
SDF4-201ENST00000263741 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
SDF4-201ENST00000263741 SLC35G6P0C7Q6 338 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 CD82P27701 267 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 OR1D4P47884 311 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 E2F2Q14209 437 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 PAGE2BQ5JRK9 111 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 RHBDD2Q6NTF9 364 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 SYVN1Q86TM6 617 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 PROSER1Q86XN7 944 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 DSELQ8IZU8 1212 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 IL22RA1Q8N6P7 574 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 CREB3L4Q8TEY5 395 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 GBP5Q96PP8 586 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 KLHL31Q9H511 634 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 SRPK3Q9UPE1 567 aa17.45■□□□□ 0.38
SDF4-201ENST00000263741 DSPP15924 2871 aaKnown RBP17.45■□□□□ 0.38
SDF4-201ENST00000263741 UBFD1O14562 309 aaKnown RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 KLK10O43240 276 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 DNAJC8O75937 253 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 OR4F21O95013 312 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CLDN9O95484 217 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 TBX6O95947 436 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 IL1RNP18510 177 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CXCR2P25025 360 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 AHRP35869 848 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CASP2P42575 452 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 SERPINB4P48594 390 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 TCHHL1Q5QJ38 904 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 FAM69BQ5VUD6 431 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 ZNF385CQ66K41 422 aaPredicted RBP17.44■□□□□ 0.38
SDF4-201ENST00000263741 MED27Q6P2C8 311 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 TMEM151BQ8IW70 566 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 CAMKVQ8NCB2 501 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 ZNF248Q8NDW4 579 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 OR7G3Q8NG95 312 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 THAP11Q96EK4 314 aa17.44■□□□□ 0.38
SDF4-201ENST00000263741 GATA5Q9BWX5 397 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms