RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CHCHD4Q8N4Q1 142 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 C19orf60Q96EN9 201 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 SEC16BQ96JE7 1060 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 FAR2Q96K12 515 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 CMKLR1Q99788 373 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 KLHL31Q9H511 634 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 APMAPQ9HDC9 416 aa23.24■■□□□ 1.31
SCN1B-201ENST00000262631 ATP6AP2A0A1C7CYW4 349 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 LRIT2A6NDA9 550 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 SAP18O00422 153 aaKnown RBP23.23■■□□□ 1.31
SCN1B-201ENST00000262631 ATP6AP2O75787 350 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 TARDBPQ13148 414 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCN1B-201ENST00000262631 C10orf62Q5T681 223 aaPredicted RBP23.23■■□□□ 1.31
SCN1B-201ENST00000262631 PRAMEF17Q5VTA0 474 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 KIRREL3Q8IZU9 778 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 AFAP1L2Q8N4X5 818 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 ADAMTS14Q8WXS8 1223 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 LIN37Q96GY3 246 aaPredicted RBP23.23■■□□□ 1.31
SCN1B-201ENST00000262631 F2RL3Q96RI0 385 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 STRADBQ9C0K7 418 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 NPHS2Q9NP85 383 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 ADGRE2Q9UHX3 823 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 RUVBL1Q9Y265 456 aaKnown RBP23.23■■□□□ 1.31
SCN1B-201ENST00000262631 LOXL2Q9Y4K0 774 aa23.23■■□□□ 1.31
SCN1B-201ENST00000262631 GMNCA6NCL1 334 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 C4orf51C9J302 202 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SHOX2O60902 331 aaPredicted RBP23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SERPINA6P08185 405 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SLC35G6P0C7Q6 338 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SERPINB1P30740 379 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 ACY1Q03154 408 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 PWP1Q13610 501 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 PRTGQ2VWP7 1150 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 XKR7Q5GH72 579 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 RNF165Q6ZSG1 346 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 Q6ZSR9 355 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 RAB11FIP2Q7L804 512 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 ARHGEF39Q8N4T4 335 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 CAMKVQ8NCB2 501 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 RFWD2Q8NHY2 731 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 NT5CQ8TCD5 201 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SLC6A16Q9GZN6 736 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 BRF2Q9HAW0 419 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SLC12A4Q9UP95 1085 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SERTM1A2A2V5 107 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 OR2B3O76000 313 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 ITIH1P19827 911 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 ZNF33BQ06732 778 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 CSTF3Q12996 717 aaKnown RBP23.22■■□□□ 1.31
SCN1B-201ENST00000262631 TMPRSS12Q86WS5 348 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 PMEPA1Q969W9 287 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 RNF31Q96EP0 1072 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 CTRCQ99895 268 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 FAM107BQ9H098 131 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 RABEP2Q9H5N1 569 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 MEAF6Q9HAF1 191 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 IRAK4Q9NWZ3 460 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 VTI1BQ9UEU0 232 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 GIMAP2Q9UG22 337 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 PPT2Q9UMR5 302 aa23.22■■□□□ 1.31
SCN1B-201ENST00000262631 MRPS2Q9Y399 296 aaKnown RBP23.22■■□□□ 1.31
SCN1B-201ENST00000262631 SLCO1B7G3V0H7 640 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 TMX2-CTNND1H3BSU7 103 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 MED26O95402 600 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 TGDSO95455 350 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 ALOX15P16050 662 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 PHEXP78562 749 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 ADPRMQ3LIE5 342 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 DEPDC1Q5TB30 811 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 KHDRBS2Q5VWX1 349 aaKnown RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 ZNF655Q8N720 491 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 GBP7Q8N8V2 638 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 MS4A6EQ96DS6 147 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 CMTM7Q96FZ5 175 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 MRPL1Q9BYD6 325 aaKnown RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 REXO4Q9GZR2 422 aaKnown RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 WDR55Q9H6Y2 383 aaPredicted RBP23.21■■□□□ 1.31
SCN1B-201ENST00000262631 DCTN4Q9UJW0 460 aa23.21■■□□□ 1.31
SCN1B-201ENST00000262631 TIAF1O95411 115 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 DRD4P21917 467 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 PTX3P26022 381 aaPredicted RBP23.2■■□□□ 1.3
SCN1B-201ENST00000262631 ETV5P41161 510 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 HK2P52789 917 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 AQP5P55064 265 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 ITGA1P56199 1179 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 MC2RQ01718 297 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 RGS1Q08116 209 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 SLC9B1Q4ZJI4 515 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 TOR1AIP1Q5JTV8 583 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 TCTE1Q5JU00 501 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 TMEM214Q6NUQ4 689 aaKnown RBP23.2■■□□□ 1.3
SCN1B-201ENST00000262631 UBE3DQ7Z6J8 389 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 DTWD1Q8N5C7 304 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 ZCCHC10Q8TBK6 192 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 FANCEQ9HB96 536 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 ENAMQ9NRM1 1142 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 SERTAD3Q9UJW9 196 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 KIF26BQ2KJY2 2108 aa23.2■■□□□ 1.3
SCN1B-201ENST00000262631 FITM1A5D6W6 292 aa23.19■■□□□ 1.3
SCN1B-201ENST00000262631 SDHDO14521 159 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms