RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 LRCH3Q96II8 777 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 THUMPD1Q9NXG2 353 aaKnown RBP11.73□□□□□ -0.53
COL8A1-201ENST00000261037 CYTH4Q9UIA0 394 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 PCDHB11Q9Y5F2 797 aa11.73□□□□□ -0.53
COL8A1-201ENST00000261037 OAZ2O95190 189 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 GSK3BP49841 420 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 RPS3AP61247 264 aaKnown RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CD83Q01151 205 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SLC35F1Q5T1Q4 408 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 NOXRED1Q6NXP6 359 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 AGTRAPQ6RW13 159 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CILP2Q8IUL8 1156 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 HSPBAP1Q96EW2 488 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 C17orf62Q9BQA9 187 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 Q9N2J8 555 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 DNAJC27Q9NZQ0 273 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 GRHPRQ9UBQ7 328 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 ITGB1BP2Q9UKP3 347 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CAPN14A8MX76 684 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 H0YGN5 161 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 M0QX08 132 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CDRT1O95170 752 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 HMGN1P05114 100 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SPANXN4Q5MJ08 99 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 GPRC6AQ5T6X5 926 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 MSANTD1Q6ZTZ1 278 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TICAM1Q8IUC6 712 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TOMM5Q8N4H5 51 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SMPDL3AQ92484 453 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 RAB8BQ92930 207 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 BIRC7Q96CA5 298 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 ALPK1Q96QP1 1244 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 DERL2Q9GZP9 239 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SLC6A15Q9H2J7 730 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM248Q9NWD8 314 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 AQP12BA6NM10 295 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 BNIP3Q12983 259 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 PCLAFQ15004 111 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 PPP1R3AQ16821 1122 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM164Q5U3C3 297 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TPRG1Q6ZUI0 275 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 IGDCC3Q8IVU1 814 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 AQP12AQ8IXF9 295 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CD244Q9BZW8 370 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 OR51I1Q9H343 314 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 B3GAT2Q9NPZ5 323 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 TCRBV21S2A2A0A5A6 115 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 VILLO15195 856 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 RLN2P04090 185 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 HEXBP07686 556 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 BMP8BP34820 402 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF41P51814 821 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 PAFAH1B3Q15102 231 aaKnown RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 NADK2Q4G0N4 442 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 LY6G5CQ5SRR4 150 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 BMP8AQ7Z5Y6 402 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 ORAI3Q9BRQ5 295 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 SLC22A4Q9H015 551 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 IL21RQ9HBE5 538 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 NLE1Q9NVX2 485 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-201ENST00000261037 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
COL8A1-201ENST00000261037 GPR89AB7ZAQ6 455 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 CREG1O75629 220 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 KLF8O95600 359 aaPredicted RBP11.71□□□□□ -0.53
COL8A1-201ENST00000261037 GPR89BP0CG08 455 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 ETV3P41162 512 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 OR8K3Q8NH51 312 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 SLC29A3Q9BZD2 475 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 IRF2BPLQ9H1B7 796 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 NFKBIEO00221 500 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 RNF13O43567 381 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 AGR2O95994 175 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 FANK1Q8TC84 345 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 ASPNQ9BXN1 380 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 CRTAC1Q9NQ79 661 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 AASSQ9UDR5 926 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 MAFFQ9ULX9 164 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 GJB5O95377 273 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 GP1BBP13224 206 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF30P17039 623 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 ARPC4P59998 168 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 CBLBQ13191 982 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 LRP8Q14114 963 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.53
COL8A1-201ENST00000261037 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
COL8A1-201ENST00000261037 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms