RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SERPINA6P08185 405 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 CCL4P13236 92 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 ALOX15P16050 662 aaPredicted RBP15.07■□□□□ 0
CCDC90B-201ENST00000260054 SDHBP21912 280 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 HNRNPH1P31943 449 aaKnown RBP15.07■□□□□ 0
CCDC90B-201ENST00000260054 HK2P52789 917 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 SNRPNP63162 240 aaKnown RBP15.07■□□□□ 0
CCDC90B-201ENST00000260054 PHEXP78562 749 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 ACY1Q03154 408 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 XKR7Q5GH72 579 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 WASHC2DQ5SRD0 308 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 Q6ZSR9 355 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 CSNK1A1LQ8N752 337 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 BMPERQ8N8U9 685 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 KCT2Q8NC54 265 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 CAMKVQ8NCB2 501 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 OR1L3Q8NH93 324 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 RFWD2Q8NHY2 731 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 NT5CQ8TCD5 201 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 OR6C1Q96RD1 312 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 SLC6A16Q9GZN6 736 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 SPRTNQ9H040 489 aaPredicted RBP15.07■□□□□ 0
CCDC90B-201ENST00000260054 OR51B5Q9H339 312 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 BRF2Q9HAW0 419 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 NPHS2Q9NP85 383 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 PPT2Q9UMR5 302 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 DCHS1Q96JQ0 3298 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 SPTBP11277 2137 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 ATP6AP2A0A1C7CYW4 349 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 TMX2-CTNND1H3BSU7 103 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 ATP6AP2O75787 350 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 SLC35G6P0C7Q6 338 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 HSD3B1P14060 373 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 DRD4P21917 467 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 HSD3B2P26439 372 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 FOXM1Q08050 763 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 SF3A3Q12874 501 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC90B-201ENST00000260054 CSTF3Q12996 717 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 PWP1Q13610 501 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 PRTGQ2VWP7 1150 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 ADPRMQ3LIE5 342 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 HOMEZQ8IX15 550 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 GBP7Q8N8V2 638 aaPredicted RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 ADAMTS14Q8WXS8 1223 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 CMTM7Q96FZ5 175 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 LIN37Q96GY3 246 aaPredicted RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 F2RL3Q96RI0 385 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 CMKLR1Q99788 373 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 STRADBQ9C0K7 418 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 KLHL31Q9H511 634 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 MEAF6Q9HAF1 191 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 SLC12A4Q9UP95 1085 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 RUVBL1Q9Y265 456 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 KIF26BQ2KJY2 2108 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 A0A1W2PNU3 283 aaPredicted RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 PMS2P1A4D2B8 440 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 LRIT2A6NDA9 550 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 C4orf51C9J302 202 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 SAP18O00422 153 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 AQP5P55064 265 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 TARDBPQ13148 414 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC90B-201ENST00000260054 SLC9B1Q4ZJI4 515 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 TCTE1Q5JU00 501 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 DEPDC1Q5TB30 811 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 PRAMEF17Q5VTA0 474 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 KHDRBS2Q5VWX1 349 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 TMPRSS12Q86WS5 348 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 ARHGEF39Q8N4T4 335 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 TRIM55Q9BYV6 548 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 FAM107BQ9H098 131 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 RABEP2Q9H5N1 569 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 WDR55Q9H6Y2 383 aaPredicted RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 FANCEQ9HB96 536 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 APMAPQ9HDC9 416 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 ENAMQ9NRM1 1142 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 IRAK4Q9NWZ3 460 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 PSD3Q9NYI0 1048 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 GIMAP2Q9UG22 337 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 DCTN4Q9UJW0 460 aa15.06■□□□□ 0
CCDC90B-201ENST00000260054 MRPS2Q9Y399 296 aaKnown RBP15.06■□□□□ 0
CCDC90B-201ENST00000260054 KNTC1P50748 2209 aa15.05■□□□□ 0
CCDC90B-201ENST00000260054 FAM149AA5PLN7 773 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 ERICH4A6NGS2 130 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 TRPC5OSA6NMA1 111 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 SLC28A1O00337 649 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 SDHDO14521 159 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 OR2B3O76000 313 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 ITIH1P19827 911 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 PTX3P26022 381 aaPredicted RBP15.05■□□□□ -0
CCDC90B-201ENST00000260054 ITGA1P56199 1179 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 RGS1Q08116 209 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 CUL3Q13618 768 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 IMPG1Q17R60 797 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 TOR1AIP1Q5JTV8 583 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 EPGNQ6UW88 154 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 RAB11FIP2Q7L804 512 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 MARCH9Q86YJ5 346 aa15.05■□□□□ -0
CCDC90B-201ENST00000260054 CACTIN-AS1Q8N1I8 211 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms