RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 OR4A15Q8NGL6 344 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 SPPL2AQ8TCT8 520 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 FAM83CQ9BQN1 747 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 RIOK2Q9BVS4 552 aaKnown RBP14.67□□□□□ -0.06
DDX56-201ENST00000258772 GPATCH2Q9NW75 528 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 NDUFAF4Q9P032 175 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 RAPGEFL1Q9UHV5 662 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 ZNF451Q9Y4E5 1061 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 TESMINQ9Y4I5 508 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 PLXNA2O75051 1894 aa14.67□□□□□ -0.06
DDX56-201ENST00000258772 GNG14A0A1W2PPG7 69 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 ZBBXA8MT70 800 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 WASH3PC4AMC7 463 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 TNFRSF11BO00300 401 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 RNASET2O00584 256 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 TGM5O43548 720 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 CATP04040 527 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 IMPA1P29218 277 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 GGT2P36268 569 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 LIPAP38571 399 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 BDKRB1P46663 353 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 GSSP48637 474 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 CTSCP53634 463 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 FPGSQ05932 587 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 SYTL3Q4VX76 610 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 SPIN4Q56A73 249 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 HENMT1Q5T8I9 393 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 KLHDC8AQ8IYD2 350 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 TRAM1L1Q8N609 369 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 OR56A3Q8NH54 315 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 RHOXF1Q8NHV9 184 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 MYLIPQ8WY64 445 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 FCGR1BQ92637 280 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 TIFAQ96CG3 184 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PLCXD1Q9NUJ7 323 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PSORS1C1Q9UIG5 152 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX56-201ENST00000258772 EXO1Q9UQ84 846 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 NPC1O15118 1278 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 ADAMDEC1O15204 470 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 RFPL2O75678 378 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 ALOX5P09917 674 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 CTSAP10619 480 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PABPC1P11940 636 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 TIA1P31483 386 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX56-201ENST00000258772 CRATP43155 626 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PXNP49023 591 aaPredicted RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 MVDP53602 400 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 RPS3AP61247 264 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 RPS13P62277 151 aaKnown RBP14.66□□□□□ -0.06
DDX56-201ENST00000258772 ELP6Q0PNE2 266 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 NOGQ13253 232 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■□□□ 12.6
DDX56-201ENST00000258772 CATSPEREQ5SY80 951 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 MLIPQ5VWP3 458 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 SLC5A8Q8N695 610 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 RASGEF1AQ8N9B8 481 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 PKP4Q99569 1192 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 DSN1Q9H410 356 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 AMBNQ9NP70 447 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 INIPQ9NRY2 104 aa14.66□□□□□ -0.06
DDX56-201ENST00000258772 NEDD8-MDP1E9PL57 170 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 M0R082 166 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 QSOX1O00391 747 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 LRG1P02750 347 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 OPN1SWP03999 348 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 HLA-EP13747 358 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 TNFRSF1BP20333 461 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 RECQLP46063 649 aaPredicted RBP14.65□□□□□ -0.06
DDX56-201ENST00000258772 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
DDX56-201ENST00000258772 CASP9P55211 416 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 CD300CQ08708 224 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 DNASE1L3Q13609 305 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 ZNF385BQ569K4 471 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 PRSS36Q5K4E3 855 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 COX20Q5RI15 118 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 ANGPTL8Q6UXH0 198 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 BTN2A2Q8WVV5 523 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 PROX1Q92786 737 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 ZSCAN5AQ9BUG6 496 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 DCSTAMPQ9H295 470 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 SLC5A10A0PJK1 596 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 TMEM221A6NGB7 291 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 LILRB3O75022 631 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 LEFTY1O75610 366 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 ETFAP13804 333 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 CA8P35219 290 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 SLC19A1P41440 591 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 CLK1P49759 484 aaKnown RBP14.65□□□□□ -0.06
DDX56-201ENST00000258772 TUBA1BP68363 451 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 HBA1P69905 142 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 LRRC74AQ0VAA2 488 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 ZNF852Q6ZMS4 543 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 SLCO4C1Q6ZQN7 724 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 TUBA1AQ71U36 451 aa14.65□□□□□ -0.06
DDX56-201ENST00000258772 CCDC103Q8IW40 242 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms