RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ONECUT2O95948 504 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 KRT6AP02538 564 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 KRT6BP04259 564 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 SMIM10L1P0DMW3 83 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 HSD3B1P14060 373 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 HSD3B2P26439 372 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 SLC1A6P48664 564 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 KRT6CP48668 564 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 MAPK10P53779 464 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 OCRLQ01968 901 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 RGS1Q08116 209 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 IFT88Q13099 833 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 MAP7Q14244 749 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 HKDC1Q2TB90 917 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 UGT3A2Q3SY77 523 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 KANK2Q63ZY3 851 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 MYLK4Q86YV6 388 aaPredicted RBP13.44□□□□□ -0.26
VPS25-201ENST00000253794 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 METTL6Q8TCB7 284 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 ZNF75CPQ92670 426 aaPredicted RBP13.44□□□□□ -0.26
VPS25-201ENST00000253794 MVB12AQ96EY5 273 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 SMIM10Q96HG1 83 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 CTRCQ99895 268 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 C20orf27Q9GZN8 174 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 AICDAQ9GZX7 198 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 BRF2Q9HAW0 419 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 DMRT3Q9NQL9 472 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 THAP1Q9NVV9 213 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 DKK4Q9UBT3 224 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 RAP2CQ9Y3L5 183 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
VPS25-201ENST00000253794 HYKKA2RU49 373 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 LRIT2A6NDA9 550 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 TRABD2BA6NFA1 517 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 URADA6NGE7 173 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 AZIN1O14977 448 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ZNF749O43361 778 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 CPNE3O75131 537 aaKnown RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 HSPA4LO95757 839 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 RBMS1P29558 406 aaKnown RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 HMOX2P30519 316 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 RORAP35398 523 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ARL1P40616 181 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 FOXA1P55317 472 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 STXBP1P61764 594 aaKnown RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 PHEXP78562 749 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 CUL3Q13618 768 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 MUM1Q2TAK8 710 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 TMEM35AQ53FP2 167 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 NIPAL1Q6NVV3 410 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ZNF517Q6ZMY9 492 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 CLYBLQ8N0X4 340 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 GBP7Q8N8V2 638 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 FAM76AQ8TAV0 307 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 PROKR1Q8TCW9 393 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 GAL3ST3Q96A11 431 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 CMTM7Q96FZ5 175 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ZNF578Q96N58 590 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 KCNA7Q96RP8 456 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 DPH2Q9BQC3 489 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 NDC1Q9BTX1 674 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ACTR5Q9H9F9 607 aaPredicted RBP13.43□□□□□ -0.26
VPS25-201ENST00000253794 CUTCQ9NTM9 273 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 FOXJ2Q9P0K8 574 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 TRAF6Q9Y4K3 522 aa13.43□□□□□ -0.26
VPS25-201ENST00000253794 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 A0A1B0GX78 115 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 MAGEB17A8MXT2 336 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 FFAR3O14843 346 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 DSCR3O14972 297 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 GPR42O15529 346 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 BRINP1O60477 761 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 ULK1O75385 1050 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 LYPLA1O75608 230 aaPredicted RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 SEMA3DO95025 777 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 MED26O95402 600 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 PCNAP12004 261 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 NEFHP12036 1026 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 SPINK2P20155 84 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 SLC5A2P31639 672 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 HNRNPH1P31943 449 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 TSFMP43897 325 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 HERC3Q15034 1050 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 DEPDC1Q5TB30 811 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 KHDRBS2Q5VWX1 349 aaKnown RBP13.42□□□□□ -0.26
VPS25-201ENST00000253794 CHSY3Q70JA7 882 aa13.42□□□□□ -0.26
VPS25-201ENST00000253794 ABHD13Q7L211 337 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms