RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 OR7G3Q8NG95 312 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 DOHHQ9BU89 302 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 NECTIN3Q9NQS3 549 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 CORO2BQ9UQ03 480 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 CCL26Q9Y258 94 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 PPIBP23284 216 aaKnown RBP17.77■□□□□ 0.43
LRP3-201ENST00000253193 PDHA2P29803 388 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 TPTEP56180 551 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 TP53BP2Q13625 1128 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 PTCHD4Q6ZW05 846 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 CBLL1Q75N03 491 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 OR8H2Q8N162 312 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 L3MBTL4Q8NA19 623 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 DNASE1L2Q92874 299 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 IL4I1Q96RQ9 567 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.43
LRP3-201ENST00000253193 NUAK2Q9H093 628 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 LINC00597Q9H2U6 94 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 RNF6Q9Y252 685 aa17.77■□□□□ 0.43
LRP3-201ENST00000253193 SCAMP2O15127 329 aaKnown RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 PRAMEF4O60810 478 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TLE2Q04725 743 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 NOGQ13253 232 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 PPIGQ13427 754 aaKnown RBP eCLIP17.76■□□□□ 0.431e-9■□□□□ 10.8
LRP3-201ENST00000253193 KEAP1Q14145 624 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 CBX2Q14781 532 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 GPNMBQ14956 572 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 PRAMEF9Q5VWM5 478 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 RAET1GQ6H3X3 334 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TRIM40Q6P9F5 258 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 RNF130Q86XS8 419 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 OR9Q2Q8NGE9 314 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 IPCEF1Q8WWN9 437 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 PKP4Q99569 1192 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 CEP44Q9C0F1 390 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TMEM39AQ9NV64 488 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 ASIC5Q9NY37 505 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 STOX2Q9P2F5 926 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 ITM2BQ9Y287 266 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 DNAJB5O75953 348 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TYRP14679 529 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 MASP1P48740 699 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TAS2R50P59544 299 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 ZC3H12BQ5HYM0 836 aaKnown RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 ZNF697Q5TEC3 545 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 ERAP2Q6P179 960 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 METTL2BQ6P1Q9 378 aaKnown RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 TNFAIP8L2Q6P589 184 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 ADAMTS19Q8TE59 1207 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 OR2AG1Q9H205 316 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 SIAEQ9HAT2 523 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 AKIP1Q9NQ31 210 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TMCC3Q9ULS5 477 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TRBV5-3A0A0A0MS03 114 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 TTC34A8MYJ7 566 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 GABARAPO95166 117 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 IFNA14P01570 189 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 APOA1P02647 267 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 PCMT1P22061 227 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 GADD45AP24522 165 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 CDC42P60953 191 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 ZXDCQ2QGD7 858 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 PROX2Q3B8N5 592 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 VANGL1Q8TAA9 524 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 CIDECQ96AQ7 238 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 TPK1Q9H3S4 243 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 HCFC1R1Q9NWW0 138 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 SIRT5Q9NXA8 310 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 PRKAB1Q9Y478 270 aa17.76■□□□□ 0.43
LRP3-201ENST00000253193 GPC6Q9Y625 555 aaPredicted RBP17.76■□□□□ 0.43
LRP3-201ENST00000253193 LATS1O95835 1130 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 PSMA3P25788 255 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 TMEM115Q12893 351 aaPredicted RBP17.75■□□□□ 0.43
LRP3-201ENST00000253193 TEAD4Q15561 434 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 EXOC3L2Q2M3D2 409 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 LHX8Q68G74 356 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 PRSS48Q7RTY5 328 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 NEIL2Q969S2 332 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 REPS1Q96D71 796 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 MAGEB10Q96LZ2 347 aaPredicted RBP17.75■□□□□ 0.43
LRP3-201ENST00000253193 SLC46A2Q9BY10 475 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 TGM5O43548 720 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 MED26O95402 600 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 ETHE1O95571 254 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 CHRM5P08912 532 aaPredicted RBP17.75■□□□□ 0.43
LRP3-201ENST00000253193 MPC1LP0DKB6 136 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 GTF2E2P29084 291 aaKnown RBP17.75■□□□□ 0.43
LRP3-201ENST00000253193 MVKQ03426 396 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 SP140Q13342 867 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 MADCAM1Q13477 382 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 KCNJ8Q15842 424 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 ZNF404Q494X3 552 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 ARMCX4Q5H9R4 360 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 SPANXN2Q5MJ10 180 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 LY6G5CQ5SRR4 150 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 C6orf183Q5T699 404 aa17.75■□□□□ 0.43
LRP3-201ENST00000253193 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms