RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GNAZP19086 355 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 ITGA3P26006 1051 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 IRF9Q00978 393 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 CDC16Q13042 620 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 RBBP5Q15291 538 aaKnown RBP21.72■■□□□ 1.07
LSM4-201ENST00000252816 PRAMEF9Q5VWM5 478 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 PARP9Q8IXQ6 854 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 CENPLQ8N0S6 344 aaPredicted RBP21.72■■□□□ 1.07
LSM4-201ENST00000252816 RBMXL3Q8N7X1 1067 aaKnown RBP21.72■■□□□ 1.07
LSM4-201ENST00000252816 NXNL1Q96CM4 212 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 ATOH8Q96SQ7 321 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 NMRAL1Q9HBL8 299 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 SNX15Q9NRS6 342 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 DNAJC11Q9NVH1 559 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 MKL2Q9ULH7 1088 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 ACOT9Q9Y305 439 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 ASB1Q9Y576 335 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 IPO13O94829 963 aaKnown RBP21.71■■□□□ 1.07
LSM4-201ENST00000252816 WISP1O95388 367 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 HPP00738 406 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 C2P06681 752 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 COX6A1P12074 109 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 RGS1Q08116 209 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 HYAL2Q12891 473 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 HERC3Q15034 1050 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 OR5T3Q8NGG3 340 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 STAG3L4Q8TBR4 150 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 CREB3L4Q8TEY5 395 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 KCTD4Q8WVF5 259 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 SLC44A1Q8WWI5 657 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 VPS50Q96JG6 964 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 MFRPQ9BY79 579 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 SLC6A16Q9GZN6 736 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 VN1R1Q9GZP7 353 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 AICDAQ9GZX7 198 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 CNOT10Q9H9A5 744 aaKnown RBP21.71■■□□□ 1.07
LSM4-201ENST00000252816 ZBTB20Q9HC78 741 aaPredicted RBP21.71■■□□□ 1.07
LSM4-201ENST00000252816 ZNF160Q9HCG1 818 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 C5AR2Q9P296 337 aa21.71■■□□□ 1.07
LSM4-201ENST00000252816 MYO18BQ8IUG5 2567 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 DOCK10Q96BY6 2186 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 UBR5O95071 2799 aaPredicted RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 A0A1W2PQ72 361 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 OR2W5A6NFC9 320 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 GALR3O60755 368 aaPredicted RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 DPM1O60762 260 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 KERAO60938 352 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 DNAJB6O75190 326 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 STK16O75716 305 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 ALDOAP04075 364 aaKnown RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 ZNF888P0CJ79 500 aaPredicted RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 ALOX12P18054 663 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 XCR1P46094 333 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 CD97P48960 835 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 MLLT10P55197 1068 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 EEF1A2Q05639 463 aaKnown RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 SLBPQ14493 270 aaKnown RBP eCLIP21.7■■□□□ 1.06
LSM4-201ENST00000252816 IGFBP7Q16270 282 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 DEFB134Q4QY38 66 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 TMEM205Q6UW68 189 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 HPS6Q86YV9 775 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.7■■□□□ 1.06
LSM4-201ENST00000252816 LRRN4CLQ8ND94 238 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 UTP15Q8TED0 518 aaKnown RBP21.7■■□□□ 1.06
LSM4-201ENST00000252816 KLHL31Q9H511 634 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 GPRC5BQ9NZH0 403 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 NUDT4Q9NZJ9 180 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 NFU1Q9UMS0 254 aa21.7■■□□□ 1.06
LSM4-201ENST00000252816 A0A087X1B8 175 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 LOC102723996A0A087X1L8 192 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 UBXN8O00124 270 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 H2AFYO75367 372 aaKnown RBP21.69■■□□□ 1.06
LSM4-201ENST00000252816 ZIC2O95409 532 aaPredicted RBP21.69■■□□□ 1.06
LSM4-201ENST00000252816 ALPPP05187 535 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 EPORP19235 508 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 CXCR2P25025 360 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 HNF4AP41235 474 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 AGTR2P50052 363 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 JMJD6Q6NYC1 403 aaPredicted RBP21.69■■□□□ 1.06
LSM4-201ENST00000252816 NDUFAF7Q7L592 441 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 AMER2Q8N7J2 671 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 SNX31Q8N9S9 440 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 TRPV3Q8NET8 790 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 UHMK1Q8TAS1 419 aaKnown RBP21.69■■□□□ 1.06
LSM4-201ENST00000252816 CAPS2Q9BXY5 557 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 LUZP4Q9P127 313 aa21.69■■□□□ 1.06
LSM4-201ENST00000252816 A0A096LPK6 155 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 IGHV1-45A0A0A0MS14 117 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 SUPT3HB4E1H0 165 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 C4orf51C9J302 202 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 SUPT3HO75486 399 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 SORBS2O94875 1100 aaKnown RBP21.68■■□□□ 1.06
LSM4-201ENST00000252816 S100BP04271 92 aaPredicted RBP21.68■■□□□ 1.06
LSM4-201ENST00000252816 SMIM10L1P0DMW3 83 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 MTHFD2P13995 350 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 RAB8AP61006 207 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 OLR1P78380 273 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 FOXK1P85037 733 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 PDK4Q16654 411 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 MINDY4Q4G0A6 757 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms