RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 RAB8BQ92930 207 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CIDECQ96AQ7 238 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 MTERF3Q96E29 417 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 FUBP3Q96I24 572 aaKnown RBP eCLIP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CDK5RAP1Q96SZ6 601 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 MMP27Q9H306 513 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 MTG2Q9H4K7 406 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DNAJC11Q9NVH1 559 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 NUFIP1Q9UHK0 495 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 PCDHGA6Q9Y5G7 932 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 ANKDD1BA6NHY2 528 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 YY2O15391 372 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF623O75123 536 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 C6orf47O95873 294 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 SPAM1P38567 509 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 BDKRB1P46663 353 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PRKAG1P54619 331 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 UGT8Q16880 541 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 LIPKQ5VXJ0 399 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 KDM4DQ6B0I6 523 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 SHFQ7M4L6 423 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-201ENST00000252597 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 VMP1Q96GC9 406 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CCDC115Q96NT0 180 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CLEC4EQ9ULY5 219 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 C5orf58C9J3I9 102 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 KLK8O60259 260 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 NUAK1O60285 661 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 OAZ2O95190 189 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 ADORA3P0DMS8 318 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CTSOP43234 321 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 SPDYE7PQ495Y7 208 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PYDC2Q56P42 97 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 RETSATQ6NUM9 610 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 NCEH1Q6PIU2 408 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 GALNT12Q8IXK2 581 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 ZZZ3Q8IYH5 903 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CHPFQ8IZ52 775 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 IQCF1Q8N6M8 205 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 GPR151Q8TDV0 419 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PEX13Q92968 403 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 ART5Q96L15 291 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 UROC1Q96N76 676 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 FAM129BQ96TA1 746 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 VPS29Q9UBQ0 182 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 CLEC2DQ9UHP7 191 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PIKFYVEQ9Y2I7 2098 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 PCDHGB3Q9Y5G1 929 aa11.54□□□□□ -0.56
USHBP1-201ENST00000252597 METTL15A6NJ78 407 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PTPN5P54829 565 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 ARTNQ5T4W7 220 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 TMPRSS11AQ6ZMR5 421 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 NXPE1Q8N323 547 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 C11orf65Q8NCR3 313 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 C1GALT1C1Q96EU7 318 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 KCTD5Q9NXV2 234 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 COMMD3Q9UBI1 195 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 IFT52Q9Y366 437 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CCL27Q9Y4X3 112 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 WDR87Q6ZQQ6 2873 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PRPS2P11908 318 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 ACRV1P26436 265 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CNR2P34972 360 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RGS6P49758 472 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CLCN4P51793 760 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 GAB1Q13480 694 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RPS26P11Q5JNZ5 115 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PAQR6Q6TCH4 344 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 MRPL10Q7Z7H8 261 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RNF130Q86XS8 419 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 HJURPQ8NCD3 748 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 TRIB2Q92519 343 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 FYTTD1Q96QD9 318 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 P2RY12Q9H244 342 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 COQ3Q9NZJ6 369 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 TEKT2Q9UIF3 430 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CLCA1A8K7I4 914 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 NOTOA8MTQ0 251 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 DSCR3O14972 297 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 GADD45GO95257 159 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 HLA-EP13747 358 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CR2P20023 1033 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PRPS1L1P21108 318 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RPS13P62277 151 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PAMR1Q6UXH9 720 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms