RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SNX20Q7Z614 316 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 DEFB128Q7Z7B8 93 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TMC8Q8IU68 726 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PXYLP1Q8TE99 480 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 KLHL6Q8WZ60 621 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 FAM122AQ96E09 287 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NSUN5Q96P11 429 aaKnown RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PHOX2BQ99453 314 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 C2orf49Q9BVC5 232 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ATP13A3Q9H7F0 1226 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 RGS13O14921 159 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TLL1O43897 1013 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NOS1APO75052 506 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CYP2A6P11509 494 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 IL7P13232 177 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 POLR2LP62875 67 aaKnown RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 IRF8Q02556 426 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 EMX1Q04741 257 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 BCL2L1Q07817 233 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NPRL3Q12980 569 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MAB21L1Q13394 359 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 INAVAQ3KP66 663 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CCBE1Q6UXH8 406 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ANKS3Q6ZW76 656 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SLC24A5Q71RS6 500 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 OR10G2Q8NGC3 310 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SLC22A17Q8WUG5 538 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CREB3L1Q96BA8 519 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TPD52L3Q96J77 140 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 FRMD6Q96NE9 622 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SMIM14Q96QK8 99 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF607Q96SK3 696 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM175Q9BSA9 504 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CD244Q9BZW8 370 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZCCHC2Q9C0B9 1178 aaKnown RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 IL1RAPQ9NPH3 570 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ACOT13Q9NPJ3 140 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ELOVL2Q9NXB9 296 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 IL17CQ9P0M4 197 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NFKBIL1Q9UBC1 381 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MBD1Q9UIS9 605 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZMYM5Q9UJ78 669 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PCDHGB6Q9Y5F9 930 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MAGED1Q9Y5V3 778 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SZT2Q5T011 3432 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 A0A0D9SEW6 157 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 A0A1B0GVM2 712 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 OR51F1A6NGY5 319 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CLCA1A8K7I4 914 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PSMD11O00231 422 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CLIC1O00299 241 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PROM1O43490 865 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PRKYO43930 277 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 GUCY1B2O75343 617 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MPC1LP0DKB6 136 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 GSTM3P21266 225 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SERPINA4P29622 427 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 FMO3P31513 532 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SPAM1P38567 509 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 DDOSTP39656 456 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PPP3R1P63098 170 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 B4GALNT1Q00973 533 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 GGTA1PQ4G0N0 100 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 CTXN3Q4LDR2 81 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 GNASQ5JWF2 1037 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 LRIF1Q5T3J3 769 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 RAP1GAP2Q684P5 730 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 RGMBQ6NW40 437 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 BHLHB9Q6PI77 547 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZC3H14Q6PJT7 736 aaKnown RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 DNAJC14Q6Y2X3 702 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 USP45Q70EL2 814 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TRIM46Q7Z4K8 759 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 UBE2Q1Q7Z7E8 422 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NLRP8Q86W28 1048 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 HJURPQ8NCD3 748 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF548Q8NEK5 533 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 OR4F6Q8NGB9 312 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 OR4A15Q8NGL6 344 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF675Q8TD23 568 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 DACT3Q96B18 629 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 AP2M1Q96CW1 435 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MCCC1Q96RQ3 725 aaPredicted RBP4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NTMT1Q9BV86 223 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 NLNQ9BYT8 704 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 FAM117AQ9C073 453 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 SMURF2Q9HAU4 748 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 ERVK-18Q9QC07 812 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 MGAT4BQ9UQ53 548 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 PTGDR2Q9Y5Y4 395 aa4.01□□□□□ -1.77
UBE4A-201ENST00000252108 TEX51A0A1B0GUA7 166 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 TSPAN11A1L157 253 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF840PA6NDX5 716 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 METTL15A6NJ78 407 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 ENPP3O14638 875 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 TBX18O95935 607 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 IFNW1P05000 195 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 CXCR2P25025 360 aa4□□□□□ -1.77
UBE4A-201ENST00000252108 HTR1BP28222 390 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms