RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ABHD13Q7L211 337 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 GSPT2Q8IYD1 628 aaKnown RBP23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 ANKRD53Q8N9V6 530 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 OR9A4Q8NGU2 314 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 WDR34Q96EX3 536 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 EFCAB11Q9BUY7 163 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 TRIM55Q9BYV6 548 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 PCDHGA9Q9Y5G4 932 aaKnown RBP23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 ATMQ13315 3056 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 KLK8O60259 260 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 SERPINA6P08185 405 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 CYC1P08574 325 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 MYBL2P10244 700 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 GFAPP14136 432 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 IL1RNP18510 177 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 HPDP32754 393 aaPredicted RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 CCL11P51671 97 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 ALDH18A1P54886 795 aaKnown RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 SETDB1Q15047 1291 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 TBCCQ15814 346 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 RBBP7Q16576 425 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 HIST2H2ACQ16777 129 aaPredicted RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 LACTB2Q53H82 288 aaPredicted RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 FBXO48Q5FWF7 155 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 XKR6Q5GH73 641 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 TECRLQ5HYJ1 363 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 CPZQ66K79 652 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 HIST2H2AA3Q6FI13 130 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 METTL2BQ6P1Q9 378 aaKnown RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 AFAP1L2Q8N4X5 818 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 CLEC1AQ8NC01 280 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 ZCCHC10Q8TBK6 192 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 SLC6A16Q9GZN6 736 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 CLK4Q9HAZ1 481 aaKnown RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 PCDHGB7Q9Y5F8 929 aa23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 TNPO3Q9Y5L0 923 aaKnown RBP23.08■■□□□ 1.29
SDF2L1-201ENST00000248958 B8ZZF3 427 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 CEACAM4O75871 244 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 SLU7O95391 586 aaKnown RBP23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 ALOX12P18054 663 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 IL10P22301 178 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 GCAP28676 217 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 CASP2P42575 452 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 FOXL2P58012 376 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 IRF8Q02556 426 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 PCDH1Q08174 1060 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 NFATC3Q12968 1075 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 E2F2Q14209 437 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 NAA30Q147X3 362 aaPredicted RBP23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 DCAF10Q5QP82 559 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 SHISA6Q6ZSJ9 500 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 LCA5Q86VQ0 697 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 PLD6Q8N2A8 252 aaKnown RBP23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 MOCOSQ96EN8 888 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 SLC25A23Q9BV35 468 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 EPB41L4BQ9H329 900 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 ANKZF1Q9H8Y5 726 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 PPCSQ9HAB8 311 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 PSMC3IPQ9P2W1 217 aaPredicted RBP23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 C3orf18Q9UK00 162 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 HS3ST3B1Q9Y662 390 aa23.07■■□□□ 1.28
SDF2L1-201ENST00000248958 SCN3AQ9NY46 2000 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 COL6A6A6NMZ7 2263 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 ANKDD1BA6NHY2 528 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 DNAJB5O75953 348 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 KLHL18O94889 574 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 EPB42P16452 691 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 EMP2P54851 167 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 STXBP1P61764 594 aaKnown RBP23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 CHAF1BQ13112 559 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 PCBP2Q15366 365 aaKnown RBP eCLIP23.06■■□□□ 1.282e-9■■■■■ 39.4
SDF2L1-201ENST00000248958 PFKFB4Q16877 469 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 OR51Q1Q8NH59 317 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 CREB3L4Q8TEY5 395 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 UBE2E3Q969T4 207 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 ATP13A2Q9NQ11 1180 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 NAALAD2Q9Y3Q0 740 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 ANGPTL3Q9Y5C1 460 aa23.06■■□□□ 1.28
SDF2L1-201ENST00000248958 PCSK5Q92824 1860 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 SOCS6O14544 535 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 GALR3O60755 368 aaPredicted RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 CLEC3AO75596 197 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 BMP10O95393 424 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 HEXBP07686 556 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 PIK3CGP48736 1102 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 AGTR2P50052 363 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 MAT1AQ00266 395 aaKnown RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 CHIT1Q13231 466 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 DOC2AQ14183 400 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 SYT16Q17RD7 645 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 TUBB8Q3ZCM7 444 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 PRSS41Q7RTY9 318 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 ZC3H7AQ8IWR0 971 aaKnown RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 PRSS58Q8IYP2 241 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 UTP15Q8TED0 518 aaKnown RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 UBLCP1Q8WVY7 318 aaPredicted RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 SCYL1Q96KG9 808 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 MLXIPLQ9NP71 852 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 CPSF2Q9P2I0 782 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms