RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CNIH3Q8TBE1 160 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 SUSD6Q92537 303 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 RBM4BQ9BQ04 359 aaKnown RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 RBM4Q9BWF3 364 aaKnown RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 CCDC90BQ9GZT6 254 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 SLC23A2Q9UGH3 650 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 EDDM13A0A1B0GTR0 161 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 H0YAE9 185 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 UGDHO60701 494 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 PCDH8O95206 1070 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 NFATC1O95644 943 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 KDELR2P33947 212 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 NAGSQ8N159 534 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 BPIFB6Q8NFQ5 453 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 OR9A1PQ8NGU1 263 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 OR5K1Q8NHB7 308 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 ASB16Q96NS5 453 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF451Q9Y4E5 1061 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 PIPSLA2A3N6 862 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 CCNDBP1O95273 360 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 KLK1P06870 262 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 TIA1P31483 386 aaKnown RBP eCLIP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 TRPC1P48995 793 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 CD47Q08722 323 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 ELP6Q0PNE2 266 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 ZBED5Q49AG3 693 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 COX20Q5RI15 118 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 TANGO2Q6ICL3 276 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 NLRP8Q86W28 1048 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 HEATR4Q86WZ0 1026 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 NRSN1Q8IZ57 195 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 CXorf40AQ8TE69 158 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 PPP1R14BQ96C90 147 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 SH3PXD2BA1X283 911 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 IGLON5A6NGN9 336 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 RTCAO00442 366 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 C6orf47O95873 294 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 IDSP22304 550 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 P2RY2P41231 377 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 THOC7Q6I9Y2 204 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 XKR5Q6UX68 686 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 CYP4Z1Q86W10 505 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 OR8J2Q8NGG1 315 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 DGCR6LQ9BY27 220 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 ZCCHC2Q9C0B9 1178 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 TRIM39Q9HCM9 518 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 FAM120CQ9NX05 1096 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 NFKBIL1Q9UBC1 381 aaPredicted RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 BAG5Q9UL15 447 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 SAMD4AQ9UPU9 718 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 EXO1Q9UQ84 846 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 SLC27A6Q9Y2P4 619 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 USP34Q70CQ2 3546 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 XPNPEP2O43895 674 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 ATE1O95260 518 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 STATHP02808 62 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 PSMB5P28074 263 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 IL5RAQ01344 420 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 ERN2Q76MJ5 926 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 DCP2Q8IU60 420 aaKnown RBP15.15■□□□□ 0.02
LRFN1-201ENST00000248668 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 DNAJB8Q8NHS0 232 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 CHTF18Q8WVB6 975 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 HHIPQ96QV1 700 aa15.15■□□□□ 0.02
LRFN1-201ENST00000248668 LOC100130705A0A1B0GUX0 176 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 ETFAP13804 333 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 EPHA2P29317 976 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 TAS2R50P59544 299 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 HBA1P69905 142 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 DPY19L1Q2PZI1 675 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 TTC23Q5W5X9 447 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 EGFLAMQ63HQ2 1017 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 CPZQ66K79 652 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 SERPINA11Q86U17 422 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 HORMAD1Q86X24 394 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 CHPFQ8IZ52 775 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 SVOPLQ8N434 492 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 SMARCD2Q92925 531 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 C11orf24Q96F05 449 aaPredicted RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 CCDC177Q9NQR7 707 aaPredicted RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 TRNAU1APQ9NX07 287 aaKnown RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 TMEFF2Q9UIK5 374 aaPredicted RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 SAMHD1Q9Y3Z3 626 aaKnown RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 PCDHB11Q9Y5F2 797 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 A0A1W2PPW3 197 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 IGFBP5P24593 272 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 HPCAL1P37235 193 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 EIF2B2P49770 351 aaKnown RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 HLCSP50747 726 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 C2orf80Q0P641 193 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 PARP8Q8N3A8 854 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 SLC5A11Q8WWX8 675 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 CHFRQ96EP1 664 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 FCRL1Q96LA6 429 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 ZDHHC5Q9C0B5 715 aa15.14■□□□□ 0.01
LRFN1-201ENST00000248668 PDP1Q9P0J1 537 aaPredicted RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 PNMA8BQ9ULN7 279 aaPredicted RBP15.14■□□□□ 0.01
LRFN1-201ENST00000248668 NINQ8N4C6 2090 aa15.13■□□□□ 0.01
LRFN1-201ENST00000248668 C1GALT1C1LP0DN25 315 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms