RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 C1orf226A1L170 272 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 FOXE1O00358 373 aaPredicted RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 ZSCAN9O15535 394 aaPredicted RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 CPSF4O95639 269 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 NFATC1O95644 943 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 ADRB3P13945 408 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 PORP16435 677 aaPredicted RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 IDSP22304 550 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 KDELR2P33947 212 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 HPCAL1P37235 193 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 CXCR4P61073 352 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 RPS13P62277 151 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 KCNC4Q03721 635 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 VEZF1Q14119 521 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 TMEM52BQ4KMG9 183 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 CPTPQ5TA50 214 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 ANXA8L1Q5VT79 327 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 RAET1GQ6H3X3 334 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 NIPAL1Q6NVV3 410 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 ZNF547Q8IVP9 402 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 LAS2Q8IYD9 372 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 LRRC56Q8IYG6 542 aaPredicted RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 ABHD11Q8NFV4 315 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 OR9A1PQ8NGU1 263 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 CDC26Q8NHZ8 85 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 SMG7Q92540 1137 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 CXorf40BQ96DE9 158 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 FAM129BQ96TA1 746 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 EFCAB11Q9BUY7 163 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 TRIM39Q9HCM9 518 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 TPRKBQ9Y3C4 175 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 MRPS14O60783 128 aaKnown RBP21.08■□□□□ 0.97
RNF39-201ENST00000244360 ZNF682O95780 498 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 GPR1P46091 355 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 IL5RAQ01344 420 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 SFSWAPQ12872 951 aaKnown RBP21.08■□□□□ 0.97
RNF39-201ENST00000244360 SYTL1Q8IYJ3 562 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 SYNPOQ8N3V7 929 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 OR10Q1Q8NGQ4 319 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 TPT1P8Q9HAU6 139 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 TM9SF3Q9HD45 589 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 HMG20AQ9NP66 347 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 LTB4R2Q9NPC1 389 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 ITM2CQ9NQX7 267 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 DEC1Q9P2X7 70 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 SH2B3Q9UQQ2 575 aa21.08■□□□□ 0.97
RNF39-201ENST00000244360 FUOMA2VDF0 154 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 CLDN25C9JDP6 229 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 SLC22A1O15245 554 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 GABARAPO95166 117 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 ANGPTL1O95841 491 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 RB1P06400 928 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 JUNDP17535 347 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 PPIBP23284 216 aaKnown RBP21.08■□□□□ 0.96
RNF39-201ENST00000244360 PPP1R8Q12972 351 aaKnown RBP21.08■□□□□ 0.96
RNF39-201ENST00000244360 AQP6Q13520 282 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 SPCS2Q15005 226 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 HKDC1Q2TB90 917 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.08■□□□□ 0.96
RNF39-201ENST00000244360 S100ZQ8WXG8 99 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 SAMD11Q96NU1 681 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 TMEM245Q9H330 911 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 ATP6V1HQ9UI12 483 aa21.08■□□□□ 0.96
RNF39-201ENST00000244360 OTOL1A6NHN0 477 aaPredicted RBP21.07■□□□□ 0.96
RNF39-201ENST00000244360 J3QRK9 145 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 ABCB1P08183 1280 aaPredicted RBP21.07■□□□□ 0.96
RNF39-201ENST00000244360 PRKACGP22612 351 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 GP2P55259 537 aaKnown RBP21.07■□□□□ 0.96
RNF39-201ENST00000244360 LRRC74AQ0VAA2 488 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 FAM78AQ5JUQ0 283 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CATSPEREQ5SY80 951 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 OR2T5Q6IEZ7 315 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CBLL1Q75N03 491 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 EIF3MQ7L2H7 374 aaKnown RBP21.07■□□□□ 0.96
RNF39-201ENST00000244360 NPAS3Q8IXF0 933 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 OR2T29Q8NH02 315 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 PPP1R16AQ96I34 528 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CCDC90BQ9GZT6 254 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 DPEP2Q9H4A9 486 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 ABCG2Q9UNQ0 655 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 GPR34Q9UPC5 381 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CORO2BQ9UQ03 480 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 EXO1Q9UQ84 846 aaKnown RBP21.07■□□□□ 0.96
RNF39-201ENST00000244360 DYRK1BQ9Y463 629 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CORINQ9Y5Q5 1042 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 AP1M2Q9Y6Q5 423 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 CHD7Q9P2D1 2997 aa21.07■□□□□ 0.96
RNF39-201ENST00000244360 PCDH7O60245 1069 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 MMP20O60882 483 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 C1GALT1C1LP0DN25 315 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 ACADLP28330 430 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 BCAP31P51572 246 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 SLBPQ14493 270 aaKnown RBP eCLIP21.06■□□□□ 0.96
RNF39-201ENST00000244360 CTF1Q16619 201 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 ZNF784Q8NCA9 323 aaPredicted RBP21.06■□□□□ 0.96
RNF39-201ENST00000244360 VPS37AQ8NEZ2 397 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 RORBQ92753 470 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 ZFYVE19Q96K21 471 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 NECTIN3Q9NQS3 549 aa21.06■□□□□ 0.96
RNF39-201ENST00000244360 PAK1IP1Q9NWT1 392 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms