RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 OR2L8Q8NGY9 312 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 WDR48Q8TAF3 677 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 NETO1Q8TDF5 533 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 TFAP2CQ92754 450 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 PPCDCQ96CD2 204 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 CUEDC1Q9NWM3 386 aaPredicted RBP22.31■■□□□ 1.16
MSX2-201ENST00000239243 PCDHGB4Q9UN71 923 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 YY2O15391 372 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 PRKD3O94806 890 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 SERPINA1P01009 418 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 KLK1P06870 262 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 FURINP09958 794 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 GLULP15104 373 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 C2orf80Q0P641 193 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 SLC14A1Q13336 389 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 VMACQ2NL98 169 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 DEPDC1Q5TB30 811 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 KHDRBS2Q5VWX1 349 aaKnown RBP22.3■■□□□ 1.16
MSX2-201ENST00000239243 FAM71E1Q6IPT2 247 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 ZCCHC8Q6NZY4 707 aaKnown RBP22.3■■□□□ 1.16
MSX2-201ENST00000239243 KIAA1324Q6UXG2 1013 aaKnown RBP22.3■■□□□ 1.16
MSX2-201ENST00000239243 PAGE2Q7Z2X7 111 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 TRIM69Q86WT6 500 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 LINC01555Q8NAE3 123 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 OR2M4Q96R27 311 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 MYOCQ99972 504 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 ZNF696Q9H7X3 374 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 DNAJB9Q9UBS3 223 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 EXO1Q9UQ84 846 aaKnown RBP22.3■■□□□ 1.16
MSX2-201ENST00000239243 PRSS38A1L453 326 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 EI24O14681 340 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 LATO43561 262 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 PKLRP30613 574 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 TAS2R50P59544 299 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 KRT80Q6KB66 452 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 SLC44A3Q8N4M1 653 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 OR4A15Q8NGL6 344 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 GOT1L1Q8NHS2 421 aaPredicted RBP22.3■■□□□ 1.16
MSX2-201ENST00000239243 QRFPRQ96P65 431 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 MS4A8Q9BY19 250 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 FAM192AQ9GZU8 254 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 KCNK12Q9HB15 430 aa22.3■■□□□ 1.16
MSX2-201ENST00000239243 C1orf226A1L170 272 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 C2CD4DB7Z1M9 353 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 KCNK5O95279 499 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 RPS9P46781 194 aaKnown RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 PRDX1Q06830 199 aaKnown RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 CLCA4Q14CN2 919 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 TRIML2Q8N7C3 387 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 FAM86B1Q8N7N1 296 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 RPLP0P6Q8NHW5 317 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 MSANTD3Q96H12 275 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 PYURFQ96I23 114 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 MYCBPQ99417 103 aaPredicted RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 CARS2Q9HA77 564 aaKnown RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 FGF22Q9HCT0 170 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 SPASTQ9UBP0 616 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 H7BY64 318 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 GBAP04062 536 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 LINGO3P0C6S8 592 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 DDX5P17844 614 aaKnown RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 PSMB5P28074 263 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 MERTKQ12866 999 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 VEZF1Q14119 521 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 ZNF551Q7Z340 670 aaPredicted RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 ZZZ3Q8IYH5 903 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 SDCCAG3Q96C92 435 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 PRAP1Q96NZ9 151 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 ADI1Q9BV57 179 aa22.29■■□□□ 1.16
MSX2-201ENST00000239243 SMPD3Q9NY59 655 aaPredicted RBP22.29■■□□□ 1.16
MSX2-201ENST00000239243 LRRC72A6NJI9 287 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 CST1P01037 141 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 ABCB1P08183 1280 aaPredicted RBP22.28■■□□□ 1.16
MSX2-201ENST00000239243 HTR1BP28222 390 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 MYBPC1Q00872 1141 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 NFATC4Q14934 902 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 ANKRD53Q8N9V6 530 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 TTLQ8NG68 377 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 ZFP90Q8TF47 636 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 NTN4Q9HB63 628 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 CD320Q9NPF0 282 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 PNPLA3Q9NST1 481 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 RPS6KA6Q9UK32 745 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 ERVK-11Q9UQG0 969 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 PLEKHM1Q9Y4G2 1056 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 AP1M2Q9Y6Q5 423 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 COLEC10Q9Y6Z7 277 aa22.28■■□□□ 1.16
MSX2-201ENST00000239243 NDUFV2P19404 249 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 HNRNPA2B1P22626 353 aaKnown RBP22.27■■□□□ 1.16
MSX2-201ENST00000239243 GSTM5P46439 218 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 ZNF385BQ569K4 471 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 CCNYL2Q5T2Q4 361 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 OR52E1Q8NGJ3 308 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 TMBIM1Q969X1 311 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 MIEF1Q9NQG6 463 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 POM121BA6NF01 834 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 DLGAP1O14490 977 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 PLPP1O14494 284 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 GPR37L1O60883 481 aa22.27■■□□□ 1.16
MSX2-201ENST00000239243 POU3F3P20264 500 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms