RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 NIPSNAP2O75323 286 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 LHCGRP22888 699 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 HSPA7P48741 367 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 PAQR6Q6TCH4 344 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 ADAM30Q9UKF2 790 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 SCN1AP35498 2009 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 BET1O15155 118 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 CCNDBP1O95273 360 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 RPS17P08708 135 aaKnown RBP13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 AVPR1BP47901 424 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 GBX2P52951 348 aaPredicted RBP13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 PTPRRQ15256 657 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 PDZD3Q86UT5 571 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 STK40Q8N2I9 435 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 ZNF655Q8N720 491 aaPredicted RBP13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 OR8K5Q8NH50 307 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 GIMAP5Q96F15 307 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 SIGLEC11Q96RL6 698 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
PCDHB5-201ENST00000231134 IQCF5A8MTL0 148 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CASKO14936 926 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 SLC7A4O43246 635 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 HPGDSO60760 199 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CCNB2O95067 398 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ADRA2AP08913 450 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 DSG2Q14126 1118 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 BCDIN3DQ7Z5W3 292 aaKnown RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ATCAYQ86WG3 371 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 SERHL2Q9H4I8 314 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 TMEM184CQ9NVA4 438 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ARID2Q68CP9 1835 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 HTR7P34969 479 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 GNPDA1P46926 289 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 RPS7P62081 194 aaKnown RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 SPHARQ15513 63 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 LRFN4Q6PJG9 635 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 DGLUCYQ7Z3D6 616 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ZFP41Q8N8Y5 198 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 EEF1AKMT1Q8WVE0 214 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ASZ1Q8WWH4 475 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 OPALINQ96PE5 141 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 HHATLQ9HCP6 504 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CLN6Q9NWW5 311 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 GPRC5BQ9NZH0 403 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 NEUROG3Q9Y4Z2 214 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 GREB1LQ9C091 1923 aaPredicted RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CHURC1-FNTBB4DL54 471 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 WNT10BO00744 389 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 STX16O14662 325 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 GLAP06280 429 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 NPR3P17342 541 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 KDELR2P33947 212 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CPSF6Q16630 551 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 B3GLCTQ6Y288 498 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 LGI4Q8N135 537 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 MARVELD3Q96A59 401 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 PANX1Q96RD7 426 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 HEBP1Q9NRV9 189 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 HPF1Q9NWY4 346 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 RPS6KA6Q9UK32 745 aa13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
PCDHB5-201ENST00000231134 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 SSNA1O43805 119 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 AKAP8O43823 692 aaKnown RBP13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 NCR1O76036 304 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 DNASE1P24855 282 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 CTBP2P56545 445 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 CDC42P60953 191 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 DEFA5Q01523 94 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 CSTF1Q05048 431 aaKnown RBP13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 ZNF273Q14593 569 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 IQCCQ4KMZ1 466 aa13.18□□□□□ -0.3
PCDHB5-201ENST00000231134 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms