RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 ODF4Q2M2E3 257 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 MLIPQ5VWP3 458 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 TPRG1Q6ZUI0 275 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 GKN2Q86XP6 184 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF565Q8N9K5 539 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 NAXEQ8NCW5 288 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 OR2L2Q8NH16 312 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 ZBTB26Q9HCK0 441 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 NUP50Q9UKX7 468 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 CMAHPQ9Y471 501 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 FXYD6-FXYD2A0A087WZ82 144 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 BLOC1S5-TXNDC5H3BN57 136 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 M0QX08 132 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 TLX2O43763 284 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-201ENST00000230538 GBAP04062 536 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 EBLN1P0CF75 366 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 SPATC1Q76KD6 591 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 SLC9B2Q86UD5 537 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 C12orf40Q86WS4 652 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 PDSS2Q86YH6 399 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 SLC7A6OSQ96CW6 309 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-201ENST00000230538 CPNE2Q96FN4 548 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-201ENST00000230538 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 GPR22Q99680 433 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 FXYD6Q9H0Q3 95 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 ACTR3BQ9P1U1 418 aa11.2□□□□□ -0.62
LAMA4-201ENST00000230538 DNAJB1P25685 340 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CDH11P55287 796 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 BNIP3Q12983 259 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CRHR2Q13324 411 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SLC36A4Q6YBV0 504 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 PHTF2Q8N3S3 785 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 GLIS1Q8NBF1 620 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 LDAHQ9H6V9 325 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 INSL6Q9Y581 213 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 LOC100509620A0A075B734 347 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 DIRAS1O95057 198 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SOX14O95416 240 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 HTR1AP08908 422 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SRCP12931 536 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CYP27C1Q4G0S4 372 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 BIRC7Q96CA5 298 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ZC3H10Q96K80 434 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CD244Q9BZW8 370 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 MRM3Q9HC36 420 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 KCNK6Q9Y257 313 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF41P51814 821 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 PPP1R8Q12972 351 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SNTA1Q13424 505 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 PCLAFQ15004 111 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 MS4A13Q5J8X5 152 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TMIGD1Q6UXZ0 262 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 Q8N9G6 341 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TMEM74Q96NL1 305 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 GTPBP2Q9BX10 602 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 DKKL1Q9UK85 242 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TEX264Q9Y6I9 313 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SMAD9O15198 467 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 FPR1P21462 350 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CAPZA1P52907 286 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF280AP59817 542 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF630Q2M218 657 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 OGFRL1Q5TC84 451 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ANKRD26P1Q6NSI1 321 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TMPRSS9Q7Z410 1059 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 OR51B5Q9H339 312 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 FARSAQ9Y285 508 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 WNT6Q9Y6F9 365 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 DLG5Q8TDM6 1919 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 HLA-DPB1P04440 258 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 FAM163BP0C2L3 166 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TYRP14679 529 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CD72P21854 359 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 S100A2P29034 98 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 MECP2P51608 486 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 RAB8AP61006 207 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TEAD2Q15562 447 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 PTCHD3Q3KNS1 767 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CILP2Q8IUL8 1156 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
LAMA4-201ENST00000230538 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 ZNF350Q9GZX5 532 aa11.19□□□□□ -0.62
LAMA4-201ENST00000230538 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms