RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 OTOAQ7RTW8 1153 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 TBC1D1Q86TI0 1168 aaPredicted RBP5.47□□□□□ -1.53
AFP-201ENST00000226359 AMIGO1Q86WK6 493 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 TMEM126BQ8IUX1 230 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 DCUN1D3Q8IWE4 304 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 LMNTD2Q8IXW0 634 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 PIANPQ8IYJ0 282 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 SYTL1Q8IYJ3 562 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 GPR135Q8IZ08 494 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 OR4E2Q8NGC2 313 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 SLC22A18Q96BI1 424 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 TMEM41AQ96HV5 264 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 SLC41A2Q96JW4 573 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 C17orf62Q9BQA9 187 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 FAM167BQ9BTA0 163 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 ROPN1BQ9BZX4 212 aaPredicted RBP5.47□□□□□ -1.53
AFP-201ENST00000226359 OR52A5Q9H2C5 316 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 ROPN1Q9HAT0 212 aaPredicted RBP5.47□□□□□ -1.53
AFP-201ENST00000226359 SLC6A20Q9NP91 592 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 SAYSD1Q9NPB0 183 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 SIDT1Q9NXL6 827 aaKnown RBP5.47□□□□□ -1.53
AFP-201ENST00000226359 ADGRE2Q9UHX3 823 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 POMT2Q9UKY4 750 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 TMEM184BQ9Y519 407 aaPredicted RBP5.47□□□□□ -1.53
AFP-201ENST00000226359 MAD1L1Q9Y6D9 718 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 FAM169AQ9Y6X4 670 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 X6R8D5 127 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 PKD1L2Q7Z442 2459 aa5.47□□□□□ -1.53
AFP-201ENST00000226359 PIPSLA2A3N6 862 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SDR42E2A6NKP2 422 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SMIM23A6NLE4 172 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 RASGRF2O14827 1237 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 CASC3O15234 703 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 ACSL3O95573 720 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 TTC4O95801 387 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 ESR1P03372 595 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SHBGP04278 402 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 KLK3P07288 261 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 DHRS4L1P0CG22 281 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 FGF5P12034 268 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 TCN2P20062 427 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 NR1D1P20393 614 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 RPS3P23396 243 aaKnown RBP eCLIP5.46□□□□□ -1.531e-65■■□□□ 12.4
AFP-201ENST00000226359 ATP5DP30049 168 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 HPDP32754 393 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 HSPA7P48741 367 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 CSE1LP55060 971 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 RPS15P62841 145 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 ACVR1Q04771 509 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 HSPA14Q0VDF9 509 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 MSLNQ13421 630 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 MYBPC3Q14896 1274 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 TGIF1Q15583 401 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 KYNUQ16719 465 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 RNASEH2BQ5TBB1 312 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 UNC5DQ6UXZ4 953 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 CLDN19Q8N6F1 224 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 RNF152Q8N8N0 203 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 BMPERQ8N8U9 685 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 ATG16L2Q8NAA4 619 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 GLIS1Q8NBF1 620 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 OR52E1Q8NGJ3 308 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 OR13J1Q8NGT2 312 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SNRNP27Q8WVK2 155 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 CPT1BQ92523 772 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 RGMAQ96B86 450 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 FOXRED1Q96CU9 486 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 ELMO2Q96JJ3 720 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SLC45A3Q96JT2 553 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 MAP3K3Q99759 626 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 TMEM109Q9BVC6 243 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SORBS1Q9BX66 1292 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 CAPS2Q9BXY5 557 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 TFB2MQ9H5Q4 396 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 FGF21Q9NSA1 209 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SYBUQ9NX95 663 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 NINJ2Q9NZG7 142 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 OR6C2Q9NZP2 312 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 SLC2A6Q9UGQ3 507 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 DUSP13Q9UII6 198 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 SERTAD3Q9UJW9 196 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 PADI2Q9Y2J8 665 aa5.46□□□□□ -1.53
AFP-201ENST00000226359 COA3Q9Y2R0 106 aaPredicted RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 URB1O60287 2271 aaKnown RBP5.46□□□□□ -1.53
AFP-201ENST00000226359 ANKRD11Q6UB99 2663 aaPredicted RBP5.46□□□□□ -1.54
AFP-201ENST00000226359 KMT2BQ9UMN6 2715 aaPredicted RBP5.46□□□□□ -1.54
AFP-201ENST00000226359 A0A087WUV0 522 aaPredicted RBP5.46□□□□□ -1.54
AFP-201ENST00000226359 A0A088AWK7 358 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 A0A0J9YY10 115 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 FAM237BA0A1B0GVD1 139 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 ISM1B1AKI9 464 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 C21orf140B9A014 251 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 B9A039 149 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 E7EQ34 232 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 GOLGA8MH3BSY2 632 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 BTN3A1O00481 513 aa5.46□□□□□ -1.54
AFP-201ENST00000226359 EIF3HO15372 352 aaKnown RBP eCLIP5.46□□□□□ -1.542e-18■□□□□ 10.7
AFP-201ENST00000226359 SPAG6O75602 509 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms