RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TDRD1Q9BXT4 1180 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 RETREG1Q9H6L5 497 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 CWH43Q9H720 699 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 PDP1Q9P0J1 537 aaPredicted RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 ZNF222Q9UK12 451 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 NPIPA1Q9UND3 350 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TAF1P21675 1872 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SLC9B1P1A6NJY1 282 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 STX16-NPEPL1H3BU86 382 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 GPR37L1O60883 481 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 CYB5AP00167 134 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 BPIP17213 487 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 RPS15AP62244 130 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 FAM174BQ3ZCQ3 159 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SLC9A4Q6AI14 798 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 PTCHD4Q6ZW05 846 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 OR5L2Q8NGL0 311 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 ZSWIM3Q96MP5 696 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 LYARQ9NX58 379 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 CDH22Q9UJ99 828 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SATB2Q9UPW6 733 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SMIM30A4D0T7 59 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 RIIAD1A6NNX1 92 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SLC16A5O15375 505 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 DNASE1L1P49184 302 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 OGFOD2Q6N063 350 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SETD9Q8NE22 299 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 SLC22A12Q96S37 553 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TTTY10Q9BZA0 68 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 FAM86C1Q9NVL1 165 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TAAR2Q9P1P5 351 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 MALT1Q9UDY8 824 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 SERPINA1P01009 418 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 GSTT1P30711 240 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 DUS1LQ6P1R4 473 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 TSEN15Q8WW01 171 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 NUAK2Q9H093 628 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TOR1BO14657 336 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 TNFRSF21O75509 655 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 GOLGA7Q7Z5G4 137 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 THAP5Q7Z6K1 395 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 SLC34A3Q8N130 599 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 PIGXQ8TBF5 258 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 SLC38A4Q969I6 547 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 CENPXA8MT69 81 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 TMEM63AO94886 807 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 IFNW1P05000 195 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 EIF1AXP47813 144 aaKnown RBP13.27□□□□□ -0.28
SIX4-201ENST00000216513 EEF1A2Q05639 463 aaKnown RBP13.27□□□□□ -0.28
SIX4-201ENST00000216513 LRP8Q14114 963 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 OR6C4Q8NGE1 309 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 OR10A6Q8NH74 314 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 PNPLA2Q96AD5 504 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 IMP4Q96G21 291 aaKnown RBP13.27□□□□□ -0.28
SIX4-201ENST00000216513 RNF11Q9Y3C5 154 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 SESN1Q9Y6P5 492 aa13.27□□□□□ -0.28
SIX4-201ENST00000216513 EMP2P54851 167 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 CDK3Q00526 305 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 SCRN3Q0VDG4 424 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 RCAN2Q14206 197 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 LAPTM4AQ15012 233 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 RAB6CQ53S08 254 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 KLHDC10Q6PID8 442 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 PIH1D2Q8WWB5 315 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 HTRA1Q92743 480 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 TRAPPC9Q96Q05 1148 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 SLC35A5Q9BS91 424 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 RAB6CQ9H0N0 254 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 RMI1Q9H9A7 625 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 TRIM38O00635 465 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 HCRTR2O43614 444 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 DNAJA2O60884 412 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 SERPINA6P08185 405 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 MTTPP55157 894 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 FAM109BQ6ICB4 259 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 PNCKQ6P2M8 343 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 NET1Q7Z628 596 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 SVOPQ8N4V2 548 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 TMIEQ8NEW7 156 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 SETD6Q8TBK2 473 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 NKIRAS2Q9NYR9 191 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 CNTN6Q9UQ52 1028 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 NPIPB15A6NHN6 443 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 YKT6O15498 198 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 EDF1O60869 148 aaKnown RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 NOS1APO75052 506 aaPredicted RBP13.27□□□□□ -0.29
SIX4-201ENST00000216513 TBPL1P62380 186 aa13.27□□□□□ -0.29
SIX4-201ENST00000216513 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms