RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ACBD6Q9BR61 282 aa10.14□□□□□ -0.79
VCL-201ENST00000211998 NANOGQ9H9S0 305 aa10.14□□□□□ -0.79
VCL-201ENST00000211998 IL37Q9NZH6 218 aa10.14□□□□□ -0.79
VCL-201ENST00000211998 C2CD4BA6NLJ0 364 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SCN2BO60939 215 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GIMD1P0DJR0 217 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 BMP2P12643 396 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PROZP22891 400 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SSR2P43308 183 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ATP4BP51164 291 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 DSC2Q02487 901 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TXNRD3NBQ6F5E7 133 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 KIAA0930Q6ICG6 404 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 CDHR3Q6ZTQ4 885 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 WDSUB1Q8N9V3 476 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 CLIP3Q96DZ5 547 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TSSK6Q9BXA6 273 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ZNF225Q9UK10 706 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SH2B3Q9UQQ2 575 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TLR6Q9Y2C9 796 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3DA0A087WVF3 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3IA0A087WXS9 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3EA0A087X179 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3KA0A087X1G2 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3FA6NER0 549 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3LB9A6J9 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 J3QLW9 94 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 C1RP00736 705 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 IFNA17P01571 189 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 HMGN1P05114 100 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TFAP2AP05549 437 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3HP0C7X1 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ZNF19P17023 458 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GGT5P36269 586 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 NDUFA9Q16795 377 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3GQ6DHY5 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3CQ6IPX1 549 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TNFAIP8L2Q6P589 184 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TBC1D3Q8IZP1 549 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 OR10G6Q8NH81 332 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TFAP2BQ92481 460 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 CLCC1Q96S66 551 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SLC29A1Q99808 456 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 NDC1Q9BTX1 674 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 OR2S2Q9NQN1 319 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 FLRT1Q9NZU1 646 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GSKIPQ9P0R6 139 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 KCNN3Q9UGI6 736 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 UGT2A1Q9Y4X1 527 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 MAFBQ9Y5Q3 323 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 A6NL46 340 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TTC34A8MYJ7 566 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ECI2O75521 394 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 NPPAP01160 153 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 IDSP22304 550 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 CA5AP35218 305 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PNLIPRP1P54315 467 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 VAMP2P63027 116 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 DBPQ10586 325 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 GK3PQ14409 553 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 C10orf62Q5T681 223 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TCEANCQ8N8B7 351 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 OR10H5Q8NGA6 315 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TMEM184CQ9NVA4 438 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PADI3Q9ULW8 664 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 RAI2Q9Y5P3 530 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 A0A1B0GVC2 190 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 LYRM1O43325 122 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TPPPO94811 219 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 PRAMEF12O95522 483 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 H1F0P07305 194 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 IL1R2P27930 398 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 MAGEA6P43360 314 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 STXBP1P61764 594 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 MC2RQ01718 297 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GSTM4Q03013 218 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SNTB2Q13425 540 aaKnown RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 PPIGQ13427 754 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCL-201ENST00000211998 SEC23BQ15437 767 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 OR4F3Q6IEY1 312 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GPR135Q8IZ08 494 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 NIPA2Q8N8Q9 360 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 OR8S1Q8NH09 359 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 CACNG6Q9BXT2 260 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 MAGEH1Q9H213 219 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ZDHHC4Q9NPG8 344 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 ERVW-1Q9UQF0 538 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 TRBC2A0A5B9 178 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 WTIPA6NIX2 430 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 TSTD3H0UI37 97 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 XKRYO14609 159 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 SLC7A4O43246 635 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 G6PDP11413 515 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 MLLT6P55198 1093 aaPredicted RBP10.13□□□□□ -0.79
VCL-201ENST00000211998 CDH11P55287 796 aa10.13□□□□□ -0.79
VCL-201ENST00000211998 OR12D2P58182 307 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms