RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SMU1Q2TAY7 513 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 TRMT11Q7Z4G4 463 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 C11orf65Q8NCR3 313 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 NIPSNAP1Q9BPW8 284 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 KLHL25Q9H0H3 589 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 RNF208Q9H0X6 261 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 RERGLQ9H628 205 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 IMPAD1Q9NX62 359 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 C5AR2Q9P296 337 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 OGDHLQ9ULD0 1010 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 TRIM17Q9Y577 477 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 RTCAO00442 366 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 SGTAO43765 313 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 AIREO43918 545 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 KDM1AO60341 852 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 PORP16435 677 aaPredicted RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 HOXB9P17482 250 aaPredicted RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 IMPA1P29218 277 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 CD97P48960 835 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 CRISP3P54108 245 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 RPS3AP61247 264 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDC27-201ENST00000066544 RGNQ15493 299 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 HTR3DQ70Z44 454 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 SLC22A16Q86VW1 577 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 LGI4Q8N135 537 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 OR10G2Q8NGC3 310 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 WDR48Q8TAF3 677 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 ECHDC3Q96DC8 303 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 MCCC1Q96RQ3 725 aaPredicted RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 FAM120CQ9NX05 1096 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 NDRG4Q9ULP0 352 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 PAIP2BQ9ULR5 123 aaKnown RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 RNF6Q9Y252 685 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 CAB39Q9Y376 341 aaPredicted RBP7.98□□□□□ -1.13
CDC27-201ENST00000066544 TMED5Q9Y3A6 229 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 KCNE2Q9Y6J6 123 aa7.98□□□□□ -1.13
CDC27-201ENST00000066544 SCAMP2O15127 329 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 GRM6O15303 877 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SERPINB7O75635 380 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 DNTTP04053 509 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 CHRM5P08912 532 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 CHI3L1P36222 383 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 HNF4AP41235 474 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SERPINB10P48595 397 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 ALDH9A1P49189 494 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 MTAPQ13126 283 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 NOGQ13253 232 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 STX19Q8N4C7 294 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SLC35A5Q9BS91 424 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 CFAP20Q9Y6A4 193 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 A0A0G2JN53 185 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SLC22A1O15245 554 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 HLA-EP13747 358 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 IDSP22304 550 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 PTGER1P34995 402 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 POLR2LP62875 67 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 TEAD2Q15562 447 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 EXOC3L2Q2M3D2 409 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 ZC3H12BQ5HYM0 836 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 TMEM215Q68D42 235 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 FAM124AQ86V42 546 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 RNF130Q86XS8 419 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 LYSMD1Q96S90 227 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SPNS1Q9H2V7 528 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 HS3ST2Q9Y278 367 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 ATG2BQ96BY7 2078 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 LINC00854A0A1B0GVQ3 168 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 H3BM21 787 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 OLFM2O95897 454 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 STATHP02808 62 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 KLK1P06870 262 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 GTF2E2P29084 291 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 GSTM4Q03013 218 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 PPIGQ13427 754 aaKnown RBP eCLIP7.97□□□□□ -1.136e-8■■■□□ 16.4
CDC27-201ENST00000066544 IL18R1Q13478 541 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 INAVAQ3KP66 663 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 GGTA1PQ4G0N0 100 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 PLEKHS1Q5SXH7 462 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 CAPN13Q6MZZ7 669 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 ERICH5Q6P6B1 374 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 C11orf74Q86VG3 221 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 TSPYL5Q86VY4 417 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 CCDC103Q8IW40 242 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 SVOPQ8N4V2 548 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 ZBTB8BQ8NAP8 495 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 OR52E4Q8NGH9 312 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 DNAJB8Q8NHS0 232 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 WDR20Q8TBZ3 569 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 OTUB1Q96FW1 271 aaPredicted RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 C7orf34Q96L11 122 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 IL4I1Q96RQ9 567 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 EMILIN2Q9BXX0 1053 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 EXOSC4Q9NPD3 245 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 ASAH2Q9NR71 780 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 DUSP12Q9UNI6 340 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 PCDHGB3Q9Y5G1 929 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 RANBP2P49792 3224 aaKnown RBP7.97□□□□□ -1.13
CDC27-201ENST00000066544 ELFN1P0C7U0 828 aa7.97□□□□□ -1.13
CDC27-201ENST00000066544 ITGA1P56199 1179 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms