RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 CfhP06909 1234 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Etv2P41163 335 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rpl6P47911 296 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr1428Q0VDY1 314 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 IqcmQ149I8 489 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Lmf1Q3U3R4 574 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Btg1-ps1Q3V0S2 161 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Btg1-ps2Q3V0X0 161 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Pnpla1Q3V1D5 599 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 IspdQ5RJG7 447 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tdpoz3Q717B4 365 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Acat3Q80X81 397 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gprc6aQ8K4Z6 928 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 SpartQ8R1X6 671 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Cbr4Q91VT4 236 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Nipal2Q91WC7 383 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zswim1Q9CWV7 455 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Oxct1Q9D0K2 520 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 PyurfQ9D1C3 112 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Kif12Q9D2Z8 642 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Glod5Q9D8I3 148 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tmprss6Q9DBI0 811 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tlr4Q9QUK6 835 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Epb41l1Q9Z2H5 879 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Scn10aQ6QIY3 1958 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm13089A2AGW7 455 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr1215A3KGY3 312 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 EXOC1LB9EK06 172 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 4930467E23RikD3Z1P8 350 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr419E9Q0Y7 313 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp882E9Q4R4 555 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm15319E9Q637 350 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Il20rbE9Q9A6 308 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Hsd17b10O08756 261 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Capns1O88456 269 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 LckP06240 509 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Hoxd4P10628 250 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Esr1P19785 599 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ccnd3P30282 292 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 PuraP42669 321 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gdf6P43028 454 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 GipP48756 144 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ddx6P54823 483 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Fpr-rs6Q3SXG2 339 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 B3gnt6Q3USF0 391 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 UrgcpQ5NCI0 926 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mxd4Q60948 209 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 HadhQ61425 314 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Pou4f3Q63955 338 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tnpo3Q6P2B1 923 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 MtdhQ80WJ7 579 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tspan12Q8BKT6 305 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mpp7Q8BVD5 576 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tmsb15lQ8C0W0 80 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm21119Q8C646 350 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Castor2Q8CAB8 329 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Nrip1Q8CBD1 1161 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Atg10Q8R1P4 215 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr273Q8VG87 317 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Man2c1Q91W89 1039 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mogat1Q91ZV4 335 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Slc8b1Q925Q3 585 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Sgo1Q9CXH7 517 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Smad9Q9JIW5 430 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm37596A0A0A6YXL2 336 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr1303A2AVW1 312 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 4930595M18RikA2RRY9 829 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Skint11A7XV14 364 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp114B2RRA8 586 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Znf518bB2RRE4 1077 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp808B8JJZ4 753 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 D7Ertd443eD2J0Y4 644 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Cd247P24161 164 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mbl1P39039 239 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 TfamP40630 243 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 RabggtbP53612 339 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Hrh1P70174 488 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 PepdQ11136 493 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Foxk2Q3UCQ1 651 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zbtb2Q3V3W4 514 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Prss36Q5K2P8 849 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ugt2b35Q8BJL9 529 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Irak2Q8CFA1 622 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zbtb20Q8K0L9 741 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 CenpiQ8K1K4 746 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 GneQ91WG8 722 aaKnown RBP8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 WwoxQ91WL8 414 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Slc3a1Q91WV7 685 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 AassQ99K67 926 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Trmt11Q9CWH5 460 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Chaf1bQ9D0N7 572 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rnase10Q9D5A9 208 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Q9D9D9 101 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Il1rl2Q9ERS7 574 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Cldn19Q9ET38 224 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rcan2Q9JHG2 197 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Prokr1Q9JKL1 393 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tas2r119Q9JKT2 335 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 PnckQ9QYK9 343 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp111Q9R164 701 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms