RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Actr8Q8R2S9 624 aaKnown RBP22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Sec16bQ91XT4 1051 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tnip2Q99JG7 430 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 GMCL1P1Q99N64 498 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Ndufs3Q9DCT2 263 aaKnown RBP22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Slc28a3Q9ERH8 703 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 NpvfQ9ESQ8 188 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Nrf1Q9WU00 503 aa22.01■■□□□ 1.11
Upf3a-201ENSMUST00000043767 TomtA1Y9I9 258 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Zfp607bG3X9H3 648 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Psmb5O55234 264 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 TgfbiP82198 683 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Cpt1aP97742 773 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Nr6a1Q64249 495 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Sox11Q7M6Y2 395 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rtp2Q80ZI2 223 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 StgQ8BM15 349 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Ccdc32Q8BS39 179 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Shisa7Q8C3Q5 558 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Adap2Q8R2V5 381 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Lsm1Q8VC85 133 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Chchd4Q8VEA4 139 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Olfr659Q8VGV6 322 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Pcdhgc3Q91XX1 934 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rsph14Q9D3W1 341 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Marveld3Q9D956 376 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Hapln2Q9ESM3 341 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Vnn3Q9QZ25 500 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tbk1Q9WUN2 729 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 VarsQ9Z1Q9 1263 aaKnown RBP22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Cylc1A0A1B0GR13 642 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 SelenonD3Z2R5 557 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Chst13D3Z6E3 336 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Vmn2r12L7N217 831 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gp5O08742 567 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 MrasO08989 208 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 PdynO35417 248 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gpr27O54897 379 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 LatO54957 242 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Csf3rP40223 837 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tsc22d1P62500 1077 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rad51Q08297 339 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Abraxas2Q3TCJ1 415 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Ube2zQ3UE37 356 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Foxl1Q64731 336 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Txndc15Q6P6J9 344 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tmeff1Q6PFE7 372 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 DgkgQ91WG7 788 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rgs19Q9CX84 216 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Armc1Q9D7A8 282 aa22■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rpl7a-ps3A0A140T8L1 270 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 A0A286YCH8 300 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 3110040M04RikA0A286YDK0 300 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 A0A286YE43 300 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Syndig1A2ANU3 258 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Ccdc62E9PVD1 701 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Vmn2r57L7N269 863 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gm527Q4KL13 310 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Sema3gQ4LFA9 780 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 ZfatQ7TS63 1237 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tmem252Q8C353 183 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 PacrglQ9D3X5 248 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Slc25a27Q9D6D0 322 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Dhx34Q9DBV3 1145 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Socs6Q9JLY0 533 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Racgap1Q9WVM1 628 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Cldn9Q9Z0S7 217 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Vmn1r3A2AMT7 306 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 SmoktcrA2KF29 484 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Serpinb9eO08806 377 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Ntrk2P15209 821 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Bmp6P20722 510 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Cuzd1P70412 606 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Nol9Q3TZX8 714 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rbl1Q64701 1063 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Nadsyn1Q711T7 725 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Letm2Q7TNU7 480 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tspan12Q8BKT6 305 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gm9881Q8BR56 211 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 TbcelQ8C5W3 424 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Rab36Q8CAM5 267 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Vmn1r79Q8R285 306 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Hdac11Q91WA3 347 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Cers2Q924Z4 380 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Dctn2Q99KJ8 402 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Mrpl45Q9D0Q7 306 aaKnown RBP21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Sp2Q9D2H6 612 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tnfsf13Q9D777 241 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Spry4Q9WTP2 300 aa21.99■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gm21083A0A0G2JFD5 256 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gm13088A2AGW6 460 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Olfr1253A2AUA2 318 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Gm10479K7N6H4 105 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Elovl3O35949 271 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 P06324 132 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Csf2rbP26955 896 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Tuba1cP68373 449 aaKnown RBP21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 Dlx5P70396 289 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 SirpaP97797 513 aa21.98■■□□□ 1.11
Upf3a-201ENSMUST00000043767 TchpQ3TVW5 497 aa21.98■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms