RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	AIMP2	Q13155	320 aa	Known RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	PWP1	Q13610	501 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	RAPSN	Q13702	412 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	TUBB8	Q3ZCM7	444 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	NXPE4	Q6UWF7	544 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	PRSS41	Q7RTY9	318 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	TMPRSS11B	Q86T26	416 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	TBC1D1	Q86TI0	1168 aa	Predicted RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	LAPTM4B	Q86VI4	370 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	HPS6	Q86YV9	775 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	KLHDC8A	Q8IYD2	350 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	TCAIM	Q8N3R3	496 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	KCT2	Q8NC54	265 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZNF740	Q8NDX6	193 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	KIAA1191	Q96A73	305 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	MRRF	Q96E11	262 aa	Known RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	SMAD5	Q99717	465 aa	Known RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	AIF1L	Q9BQI0	150 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	TRIM4	Q9C037	500 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	EPN3	Q9H201	632 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	ACSS3	Q9H6R3	686 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	CNOT10	Q9H9A5	744 aa	Known RBP	14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	ANKH	Q9HCJ1	492 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	WWOX	Q9NZC7	414 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	IDS	B3KWA1	339 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	MASP2	O00187	686 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	NDUFS4	O43181	175 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	IPO13	O94829	963 aa	Known RBP	14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SERPIND1	P05546	499 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	HEXB	P07686	556 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	IL1RN	P18510	177 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	GNAZ	P19086	355 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	ECHS1	P30084	290 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	GGT5	P36269	586 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	GDF5	P43026	501 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SCTR	P47872	440 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	EMP2	P54851	167 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SOX8	P57073	446 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	MAT1A	Q00266	395 aa	Known RBP	14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	REEP5	Q00765	189 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	TLE1	Q04724	770 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	MYBPC3	Q14896	1274 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	UAP1	Q16222	522 aa	Predicted RBP	14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SYT16	Q17RD7	645 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	C18orf21	Q32NC0	220 aa	Predicted RBP	14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	COLEC12	Q5KU26	742 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	MROH9	Q5TGP6	573 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	VWA5B1	Q5TIE3	1220 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SULT1C3	Q6IMI6	304 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	CCDC91	Q7Z6B0	441 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZC3H7A	Q8IWR0	971 aa	Known RBP	14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	OR11G2	Q8NGC1	345 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZCCHC10	Q8TBK6	192 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	STAG3L4	Q8TBR4	150 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SPNS1	Q9H2V7	528 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	NMRAL1	Q9HBL8	299 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	CD274	Q9NZQ7	290 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	C5AR2	Q9P296	337 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZFP69B	Q9UJL9	534 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	RNF112	Q9ULX5	631 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC22A7	Q9Y694	548 aa		14.25	□□□□□ -0.13
PHGDH-231	ENST00000641939	PYCARD-AS1	I3L0S3	204 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	SGK494	L7N484	410 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	MAP2K7	O14733	419 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	PCDH17	O14917	1159 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	TAPBP	O15533	448 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	DPM1	O60762	260 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	BMP10	O95393	424 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ACSL3	O95573	720 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ALPP	P05187	535 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	LTA4H	P09960	611 aa	Known RBP	14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ACPP	P15309	386 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	TFEB	P19484	476 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ITGA3	P26006	1051 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	AHR	P35869	848 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	GMPR	P36959	345 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	RGS1	Q08116	209 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	DLG1	Q12959	904 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	CDC16	Q13042	620 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	BMPR2	Q13873	1038 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	HERC3	Q15034	1050 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	UBAP2	Q5T6F2	1119 aa	Known RBP	14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ATG9B	Q674R7	924 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	PDPR	Q8NCN5	879 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	MOCOS	Q96EN8	888 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	TMEM79	Q9BSE2	394 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	CAPS2	Q9BXY5	557 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	FUT8	Q9BYC5	575 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ALG9	Q9H6U8	611 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	IGSF5	Q9NSI5	407 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	DNAJC11	Q9NVH1	559 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	GPRC5B	Q9NZH0	403 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	ACOT9	Q9Y305	439 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	NAALAD2	Q9Y3Q0	740 aa		14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	UBR5	O95071	2799 aa	Predicted RBP	14.24	□□□□□ -0.13
PHGDH-231	ENST00000641939	FLNC	Q14315	2725 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939		A0A087X1B8	175 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	HMX2	A2RU54	273 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	ALOX12B	O75342	701 aa		14.23	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms