RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PLEKHM1Q9Y4G2 1056 aa7.71□□□□□ -1.17
SCARB2-220ENST00000640076 TP53BP1Q12888 1972 aaPredicted RBP7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ARPC4-TTLL3A0A0A6YYG9 625 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 WDR91A4D1P6 747 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 NEMP2A6NFY4 417 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 SYCE1LA8MT33 242 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 GFYI3L273 518 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 UBXN8O00124 270 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 VILLO15195 856 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 GDF9O60383 454 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ADAM11O75078 769 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 C8GP07360 202 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ATP5F1P24539 256 aaPredicted RBP7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ACADLP28330 430 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ALDH3A1P30838 453 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
SCARB2-220ENST00000640076 CSNK1EP49674 416 aaKnown RBP7.71□□□□□ -1.18
SCARB2-220ENST00000640076 AFF3P51826 1226 aaKnown RBP7.71□□□□□ -1.18
SCARB2-220ENST00000640076 IL1RL1Q01638 556 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ABRQ12979 859 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 SP140Q13342 867 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 PDK4Q16654 411 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 PHKG1Q16816 387 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ZNF542PQ5EBM4 170 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 GPSM1Q86YR5 675 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 NUDCD3Q8IVD9 361 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 C10orf107Q8IVU9 208 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 EXT2Q93063 718 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 MDFIQ99750 246 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 SLC12A9Q9BXP2 914 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 TMEM168Q9H0V1 697 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 OSGEPL1Q9H4B0 414 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 PRDM13Q9H4Q3 707 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 ACSL5Q9ULC5 683 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 OARD1Q9Y530 152 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 FANCMQ8IYD8 2048 aa7.71□□□□□ -1.18
SCARB2-220ENST00000640076 GOLGA4Q13439 2230 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TRBV23OR9-2A0A075B6M9 112 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 LRRC14BA6NHZ5 514 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 A8MT66 165 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SUPT3HB4E1H0 165 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SLC16A5O15375 505 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PSIP1O75475 530 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SUPT3HO75486 399 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PAHP00439 452 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TNFP01375 233 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SLC35G4P0C7Q5 338 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TPBGLP0DKB5 382 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TAC1P20366 129 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 RPL10P27635 214 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 BCL6P41182 706 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CLCNKAP51800 687 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 NXPH1P58417 271 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TGFBIQ15582 683 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ZNF362Q5T0B9 420 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SHQ1Q6PI26 577 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 FRA10AC1Q70Z53 315 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CCL4L1Q8NHW4 92 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 THAP4Q8WY91 577 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CCDC126Q96EE4 140 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 MAGEB18Q96M61 343 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 COL25A1Q9BXS0 654 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CAPS2Q9BXY5 557 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 WWP1Q9H0M0 922 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TCEAL2Q9H3H9 227 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CCDC134Q9H6E4 229 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 RDH14Q9HBH5 336 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PARVBQ9HBI1 364 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TMEM74BQ9NUR3 256 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PILRBQ9UKJ0 227 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PSMD13Q9UNM6 376 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PDE10AQ9Y233 779 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 NOSIPQ9Y314 301 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ATXN2Q99700 1313 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 A0A1B0GTW7 788 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ARHGEF33A8MVX0 844 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PRR33A8MZF0 331 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 KLK8O60259 260 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 TRIM13O60858 407 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 SMIM24O75264 130 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 IPO13O94829 963 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 GOSR1O95249 250 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CATP04040 527 aaKnown RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CSF2P04141 144 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ENO2P09104 434 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 FGF3P11487 239 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 GFAPP14136 432 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 BGNP21810 368 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 IDSP22304 550 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 AK4P27144 223 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 BLKP51451 505 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 PRKAA2P54646 552 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 DNAJB13P59910 316 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ILF3Q12906 894 aaKnown RBP eCLIP7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CHI3L2Q15782 390 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 ADRM1Q16186 407 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CATSPEREQ5SY80 951 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 LIPMQ5VYY2 423 aa7.7□□□□□ -1.18
SCARB2-220ENST00000640076 CES4AQ5XG92 561 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms