RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FZD3Q9NPG1 666 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 MGAT4DA6NG13 374 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 SHISA7A6NL88 538 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 CLIC1O00299 241 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 GNGT2O14610 69 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ETHE1O95571 254 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 IST1P53990 364 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 AGERQ15109 404 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ZIK1Q3SY52 487 aaPredicted RBP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ADNP2Q6IQ32 1131 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 SLCO4C1Q6ZQN7 724 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ADHFE1Q8IWW8 467 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 HUS1BQ8NHY5 278 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 FAM131CQ96AQ9 280 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 PYURFQ96I23 114 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 MPP4Q96JB8 637 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 MYOCQ99972 504 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 C1QTNF2Q9BXJ5 285 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 TEX101Q9BY14 249 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 YTHDF1Q9BYJ9 559 aaKnown RBP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 WDR26Q9H7D7 661 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 TRPV5Q9NQA5 729 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 C17orf113A0A1B0GUU1 675 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 RNGTTO60942 597 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 CCNDBP1O95273 360 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 GPX2P18283 190 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 ASMTP46597 345 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 CCR3P51677 355 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 TBPL1P62380 186 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 PPP2CBP62714 309 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 RPS21P63220 83 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 PPP2CAP67775 309 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 RAE1P78406 368 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 MYBPC3Q14896 1274 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 SF1Q15637 639 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 LRIT3Q3SXY7 679 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 CAPN13Q6MZZ7 669 aaPredicted RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 TMPRSS11BQ86T26 416 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 SYTL1Q8IYJ3 562 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 ZCCHC7Q8N3Z6 543 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 C1orf52Q8N6N3 182 aaKnown RBP14.52□□□□□ -0.09
TRIM3-215ENST00000639856 RPLP0P6Q8NHW5 317 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 OSBPL10Q9BXB5 764 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 AASDHPPTQ9NRN7 309 aa14.52□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3DA0A087WVF3 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3IA0A087WXS9 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3EA0A087X179 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3KA0A087X1G2 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3FA6NER0 549 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3LB9A6J9 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 MBTPS2O43462 519 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 EPN2O95208 641 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 FUCA1P04066 466 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3HP0C7X1 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ENGP17813 658 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 DRD1P21728 446 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ACADLP28330 430 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TRIM23P36406 574 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 PNLIPRP1P54315 467 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 PPP2R2BQ00005 443 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SGCGQ13326 291 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 DYNC1I2Q13409 638 aaKnown RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 LAPTM5Q13571 262 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 PLCL1Q15111 1095 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SPIN4Q56A73 249 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TMEM31Q5JXX7 168 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3GQ6DHY5 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3CQ6IPX1 549 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 MED27Q6P2C8 311 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TMEM92Q6UXU6 159 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ZNF621Q6ZSS3 439 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 LRRTM4Q86VH4 590 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 AMZ2Q86W34 360 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D3Q8IZP1 549 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 EID3Q8N140 333 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 CDC26Q8NHZ8 85 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 CHTF18Q8WVB6 975 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 MUS81Q96NY9 551 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SLC17A9Q9BYT1 436 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ZDHHC5Q9C0B5 715 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 OR52A5Q9H2C5 316 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 C8orf33Q9H7E9 229 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 USE1Q9NZ43 259 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 RSL24D1Q9UHA3 163 aaKnown RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 MAPRE3Q9UPY8 281 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ERVK-11Q9UQG0 969 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SCAMP2O15127 329 aaKnown RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 ANXA4P09525 319 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 LAMP1P11279 417 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 NPPBP16860 134 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 IGFALSP35858 605 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 VAC14Q08AM6 782 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 CCNYL2Q5T2Q4 361 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 GPR155Q7Z3F1 870 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 CLECL1Q8IZS7 167 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 PGBD3Q8N328 593 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 REPS1Q96D71 796 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SIPA1Q96FS4 1042 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 MRGPRX1Q96LB2 322 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms