RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CD200R1Q8TD46 325 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 IPCEF1Q8WWN9 437 aaPredicted RBP13.96□□□□□ -0.18
SCARB2-216ENST00000639300 COQ7Q99807 217 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 PEX16Q9Y5Y5 336 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 ANKRD36CQ5JPF3 1778 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TTC34A8MYJ7 566 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 H3BNH8 94 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 EEDO75530 441 aaKnown RBP13.95□□□□□ -0.18
SCARB2-216ENST00000639300 INMTO95050 263 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF12P17014 697 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 CCT3P49368 545 aaKnown RBP13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TPTEP56180 551 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 PTPRRQ15256 657 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TLDC1Q6P9B6 456 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 C11orf49Q9H6J7 331 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF222Q9UK12 451 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 UTS2RQ9UKP6 389 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 SATB2Q9UPW6 733 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 BACE2Q9Y5Z0 518 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 MATN4O95460 622 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 PRKAR1AP10644 381 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 GRIK2Q13002 908 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 OR4E2Q8NGC2 313 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ALPK1Q96QP1 1244 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 CALML5Q9NZT1 146 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 DDX60Q8IY21 1712 aaKnown RBP13.95□□□□□ -0.18
SCARB2-216ENST00000639300 SLC22A1O15245 554 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 SSNA1O43805 119 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 C4BPBP20851 252 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 NTHL1P78549 312 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 FPGSQ05932 587 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 GALNT1Q10472 559 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-216ENST00000639300 CBX3Q13185 183 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF805Q5CZA5 627 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ENPP6Q6UWR7 440 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 HMGN2P46Q86SG4 172 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 FCGR1BQ92637 280 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 ISOC1Q96CN7 298 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 C17orf62Q9BQA9 187 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 CDC14AQ9UNH5 594 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 SAGE2PA6NJ88 616 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 RTCAO00442 366 aaKnown RBP13.95□□□□□ -0.18
SCARB2-216ENST00000639300 FSHRP23945 695 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 VBP1P61758 197 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 KLHDC9Q8NEP7 349 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TRPV1Q8NER1 839 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 MZB1Q8WU39 189 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 TM9SF3Q9HD45 589 aa13.95□□□□□ -0.18
SCARB2-216ENST00000639300 LRP5O75197 1615 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 TLX2O43763 284 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-216ENST00000639300 SLC13A2Q13183 592 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 IER5LQ5T953 404 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 KIAA1614Q5VZ46 1190 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 KANK2Q63ZY3 851 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 FAM91A1Q658Y4 838 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 ARNT2Q9HBZ2 717 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 POFUT2Q9Y2G5 429 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RPL36Q9Y3U8 105 aaKnown RBP13.94□□□□□ -0.18
SCARB2-216ENST00000639300 EDDM13A0A1B0GTR0 161 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RIIAD1A6NNX1 92 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 TFPTP0C1Z6 253 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 HSD17B1P14061 328 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 CSTF2P33240 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCARB2-216ENST00000639300 KHKP50053 298 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 PGDP52209 483 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RAB39AQ14964 217 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 ATG9BQ674R7 924 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 VTCN1Q7Z7D3 282 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 CLECL1Q8IZS7 167 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RFKQ969G6 155 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 TMEM138Q9NPI0 162 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 P2RX2Q9UBL9 471 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 HMX2A2RU54 273 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 TLR4O00206 839 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 CLDN4O14493 209 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RASAL1O95294 804 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 ALPPP05187 535 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 FGF4P08620 206 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 TAF13Q15543 124 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 FAM180BQ6P0A1 224 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 CRTC1Q6UUV9 634 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RAB43Q86YS6 212 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF248Q8NDW4 579 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 OMA1Q96E52 524 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 SCRN2Q96FV2 425 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 IFT27Q9BW83 186 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 LINC00597Q9H2U6 94 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 EURLQ9NYK6 297 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
SCARB2-216ENST00000639300 A0A096LPI6 279 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 IRGMA1A4Y4 181 aa13.93□□□□□ -0.18
SCARB2-216ENST00000639300 DENRO43583 198 aaKnown RBP13.93□□□□□ -0.18
SCARB2-216ENST00000639300 ARCN1P48444 511 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms