RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MMP25Q9NPA2 562 aa3.2□□□□□ -1.9
CCDC7-213ENST00000639290 TPSG1Q9NRR2 321 aa3.2□□□□□ -1.9
CCDC7-213ENST00000639290 DDX19AQ9NUU7 478 aaKnown RBP3.2□□□□□ -1.9
CCDC7-213ENST00000639290 QPCTLQ9NXS2 382 aa3.2□□□□□ -1.9
CCDC7-213ENST00000639290 NSMCE4AQ9NXX6 385 aa3.2□□□□□ -1.9
CCDC7-213ENST00000639290 A0A087WWV3 80 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SYNDIG1LA6NDD5 238 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ZNF233A6NK53 670 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 F5H0A9 414 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PEX1O43933 1283 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 GLSO94925 669 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 H2AFB1P0C5Y9 115 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 H2AFB2P0C5Z0 115 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ITIH2P19823 946 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 NDUFS1P28331 727 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 CD79BP40259 229 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 MTNR1BP49286 362 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 CYB561P49447 251 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 WASHC5Q12768 1159 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PSMD6Q15008 389 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 DNAJC21Q5F1R6 531 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ZBTB37Q5TC79 503 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 FAM205BPQ63HN1 556 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 FBXL22Q6P050 247 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PRMT9Q6P2P2 845 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 KDELC1Q6UW63 502 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 TMCO3Q6UWJ1 677 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 RBMS3Q6XE24 437 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 FRMD7Q6ZUT3 714 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SIX6OS1Q8N1H7 587 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 RYBPQ8N488 228 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 EMC1Q8N766 993 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 KCT2Q8NC54 265 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 OR5B17Q8NGF7 314 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 FAM71BQ8TC56 605 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ADAMTS16Q8TE57 1224 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SGCDQ92629 289 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 AKAP1Q92667 903 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SNX21Q969T3 373 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 WFIKKN1Q96NZ8 548 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SOX7Q9BT81 388 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 MED18Q9BUE0 208 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PDE11AQ9HCR9 933 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 TAS2R16Q9NYV7 291 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 DNPEPQ9ULA0 475 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 TRIM33Q9UPN9 1127 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 CORO2BQ9UQ03 480 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 GPR55Q9Y2T6 319 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PCDHB4Q9Y5E5 795 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SNX13Q9Y5W8 968 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 MALRD1Q5VYJ5 2156 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PABPN1LA6NDY0 278 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 A6NLC8 198 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 EEF1E1-BLOC1S5C9J1V9 151 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 J3QLI3 93 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 EEF1E1O43324 174 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 HS6ST1O60243 411 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 KDM1AO60341 852 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 NGFP01138 241 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 MTHFD1P11586 935 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 CTNNA1P35221 906 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 CPA2P48052 419 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 KPNA2P52292 529 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ARF5P84085 180 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 OCA2Q04671 838 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PRKAA1Q13131 559 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PDCD1Q15116 288 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 MAPKAPK3Q16644 382 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ZNF699Q32M78 642 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 HP1BP3Q5SSJ5 553 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 AGAP6Q5VW22 663 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SSX8Q7RTT4 187 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 DAAM2Q86T65 1068 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 DNAAF5Q86Y56 855 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 BPIFB2Q8N4F0 458 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 TNIP2Q8NFZ5 429 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 TP53INP1Q96A56 240 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 LRRC58Q96CX6 371 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ECHDC3Q96DC8 303 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ACCSQ96QU6 501 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 STRA6Q9BX79 667 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 THAP2Q9H0W7 228 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ESM1Q9NQ30 184 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 FAM49BQ9NUQ9 324 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 IRAK4Q9NWZ3 460 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 PRR13Q9NZ81 148 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 GRHPRQ9UBQ7 328 aa3.19□□□□□ -1.9
CCDC7-213ENST00000639290 ZMAT5Q9UDW3 170 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 C19orf25Q9UFG5 118 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 SF3B6Q9Y3B4 125 aaKnown RBP3.19□□□□□ -1.9
CCDC7-213ENST00000639290 KLF18A0A0U1RQI7 1052 aa3.18□□□□□ -1.9
CCDC7-213ENST00000639290 A0A1W2PP18 115 aa3.18□□□□□ -1.9
CCDC7-213ENST00000639290 CLPSL1A2RUU4 121 aa3.18□□□□□ -1.9
CCDC7-213ENST00000639290 GTPBP10A4D1E9 387 aaKnown RBP3.18□□□□□ -1.9
CCDC7-213ENST00000639290 YJEFN3A6XGL0 299 aa3.18□□□□□ -1.9
CCDC7-213ENST00000639290 A8MXE2 369 aa3.18□□□□□ -1.9
CCDC7-213ENST00000639290 FAM229AH3BQW9 127 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms