RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	HSPA7	P48741	367 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	TAGLN	Q01995	201 aa	Known RBP	13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SNTA1	Q13424	505 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	USP39	Q53GS9	565 aa	Known RBP	13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ANGPTL8	Q6UXH0	198 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	PLCZ1	Q86YW0	608 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	FRMD6	Q96NE9	622 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SRR	Q9GZT4	340 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ASIC5	Q9NY37	505 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	PCDHB7	Q9Y5E2	793 aa		13.22	□□□□□ -0.29
KCNMA1-238	ENST00000638514	PCP4L1	A6NKN8	68 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ESR1	P03372	595 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SLC9A3	P48764	834 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	HYAL2	Q12891	473 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SLC14A1	Q13336	389 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ALF	Q53S48	1182 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	EIF3M	Q7L2H7	374 aa	Known RBP	13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	RNF180	Q86T96	592 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	RGL4	Q8IZJ4	473 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	COQ8B	Q96D53	544 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SCLY	Q96I15	445 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	C1orf74	Q96LT6	269 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	EPYC	Q99645	322 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	MGLL	Q99685	303 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	GPR63	Q9BZJ6	419 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	GFRA2	O00451	464 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	NOS1AP	O75052	506 aa	Predicted RBP	13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	B3GALT4	O96024	378 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	F2	P00734	622 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	RPS14	P62263	151 aa	Known RBP	13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	DDX39B	Q13838	428 aa	Known RBP	13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	DMC1	Q14565	340 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ZNF79	Q15937	498 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	VMAC	Q2NL98	169 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	TRIM48	Q8IWZ4	208 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	OR10T2	Q8NGX3	314 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	DEDD2	Q8WXF8	326 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SMIM14	Q96QK8	99 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	OR5M11	Q96RB7	305 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	CNPPD1	Q9BV87	410 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ASPN	Q9BXN1	380 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	GKN1	Q9NS71	199 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	TMEM248	Q9NWD8	314 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	TAS2R16	Q9NYV7	291 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	ZNF451	Q9Y4E5	1061 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	PCDHGC4	Q9Y5F7	938 aa		13.21	□□□□□ -0.29
KCNMA1-238	ENST00000638514	SH3BP5	O60239	455 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ALPP	P05187	535 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PTPN6	P29350	595 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CCND3	P30281	292 aa	Predicted RBP	13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PGF	P49763	221 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	IL10RB	Q08334	325 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ASAH1	Q13510	395 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LRRC73	Q5JTD7	316 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PDE12	Q6L8Q7	609 aa	Known RBP	13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	DPY19L3	Q6ZPD9	716 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GLT6D1	Q7Z4J2	308 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SERPINA11	Q86U17	422 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LRRTM3	Q86VH5	581 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZZZ3	Q8IYH5	903 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TCTE3	Q8IZS6	198 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	RDH10	Q8IZV5	341 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ASIC4	Q96FT7	647 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SLC39A13	Q96H72	371 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZSCAN5A	Q9BUG6	496 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TTLL2	Q9BWV7	592 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TEKT2	Q9UIF3	430 aa		13.21	□□□□□ -0.3
KCNMA1-238	ENST00000638514	COL4A4	P53420	1690 aa	Predicted RBP	13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TNS1	Q9HBL0	1735 aa	Known RBP	13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	NUMA1	Q14980	2115 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514		B4DXG7	233 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	HAS3	O00219	553 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	RFXANK	O14593	260 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GPX5	O75715	221 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	HOXB9	P17482	250 aa	Predicted RBP	13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PSAPL1	Q6NUJ1	521 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	XKRX	Q6PP77	449 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	C19orf48	Q6RUI8	117 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CBLL1	Q75N03	491 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ATCAY	Q86WG3	371 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LIX1L	Q8IVB5	337 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LAX1	Q8IWV1	398 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PIANP	Q8IYJ0	282 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PGBD3	Q8N328	593 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	YIPF7	Q8N8F6	280 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TPD52L3	Q96J77	140 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CINP	Q9BW66	212 aa	Predicted RBP	13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ACAT2	Q9BWD1	397 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	RNF121	Q9H920	327 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	FFAR2	O15552	330 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CKM	P06732	381 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CCNYL3	P0C7X3	344 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CD9	P21926	228 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TTPA	P49638	278 aa		13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	AP2S1	P53680	142 aa	Predicted RBP	13.2	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PLD1	Q13393	1074 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms