RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SLC22A18Q96BI1 424 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 C8orf44Q96CB5 159 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 SNRNP40Q96DI7 357 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 MAGEB18Q96M61 343 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 OLFM1Q99784 485 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 MACROD1Q9BQ69 325 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 NDC1Q9BTX1 674 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 IARS2Q9NSE4 1012 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 ASF1BQ9NVP2 202 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 INTS10Q9NVR2 710 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 GPR83Q9NYM4 423 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 MOCS1Q9NZB8 636 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 KLHL42Q9P2K6 505 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 TAC3Q9UHF0 121 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 SRPK3Q9UPE1 567 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 PDE10AQ9Y233 779 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ZNF451Q9Y4E5 1061 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ZGRF1Q86YA3 2104 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 A0A1W2PQ72 361 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 BLACEA4D250 179 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 H3BMM5 538 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 E2F3O00716 465 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 KPNA5O15131 536 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 TYROBPO43914 113 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SRPX2O60687 465 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 JRKO75564 520 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 FKBP9O95302 570 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 CBX6O95503 412 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 RPN2P04844 631 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ZGLP1P0C6A0 271 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 MPC1LP0DKB6 136 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 COX6A1P12074 109 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SLC26A3P40879 764 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 CCNFP41002 786 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ARSFP54793 590 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 MAT1AQ00266 395 aaKnown RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 MGAT5Q09328 741 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 MPP2Q14168 576 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 GRM7Q14831 915 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ARHGAP19Q14CB8 494 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 EIF2S3LQ2VIR3 472 aaKnown RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 ZC3H12BQ5HYM0 836 aaKnown RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 TCTE1Q5JU00 501 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 TEDDM1Q5T9Z0 273 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 RNF187Q5TA31 235 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 VWA5B1Q5TIE3 1220 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 HHATQ5VTY9 493 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 PAQR3Q6TCH7 311 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 RGS9BPQ6ZS82 235 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SDCCAG8Q86SQ7 713 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 RAB43Q86YS6 212 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ZC3H7AQ8IWR0 971 aaKnown RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 PRSS58Q8IYP2 241 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 FAM26EQ8N5C1 309 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 OTUD6BQ8N6M0 293 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 PPM1NQ8N819 430 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ANKS4BQ8N8V4 417 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 BANPQ8N9N5 519 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 MGARPQ8TDB4 240 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 MZB1Q8WU39 189 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 EEF1AKMT1Q8WVE0 214 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SKA2Q8WVK7 121 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 SMPDL3AQ92484 453 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 N4BP2L2Q92802 583 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 PNPLA2Q96AD5 504 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 OR4K3Q96R72 315 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 ZFYVE21Q9BQ24 234 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 TSSK1BQ9BXA7 367 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 RAB11FIP5Q9BXF6 653 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SLC7A5P2Q9GIP4 190 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 AICDAQ9GZX7 198 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SPNS1Q9H2V7 528 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 RABEP2Q9H5N1 569 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 WDR54Q9H977 334 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 SMYD2Q9NRG4 433 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 C20orf96Q9NUD7 363 aaPredicted RBP7.45□□□□□ -1.22
PNKP-229ENST00000637897 TXLNGQ9NUQ3 528 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 NDOR1Q9UHB4 597 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 PCDHGA10Q9Y5H3 936 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 PSAT1Q9Y617 370 aa7.45□□□□□ -1.22
PNKP-229ENST00000637897 NOTCH2Q04721 2471 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 SCN2AQ99250 2005 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 A0A1W2PPM1 405 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 WIPF3A6NGB9 483 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 FOXO6A8MYZ6 492 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 TRIM49D1C9J1S8 452 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 H7BY64 318 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 SPAG7O75391 227 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PIAS1O75925 651 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 WISP3O95389 354 aaPredicted RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 EIF2S1P05198 315 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 RPA3P35244 121 aaPredicted RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 BCL6P41182 706 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 RRADP55042 308 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 CSNK1G2P78368 415 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms