RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SH2B3Q9UQQ2 575 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 PRKAB1Q9Y478 270 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 PCDHGA6Q9Y5G7 932 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 GFRA2O00451 464 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 CYP7B1O75881 506 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 ABLIM3O94929 683 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MAPK1P28482 360 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MAGEA2P43356 314 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MTA1Q13330 715 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 CAPN13Q6MZZ7 669 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 AGTRAPQ6RW13 159 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 NCCRP1Q6ZVX7 275 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 FAM217AQ8IXS0 508 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 POC5Q8NA72 575 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 ZNF740Q8NDX6 193 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 UBTD2Q8WUN7 234 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 YIPF6Q96EC8 236 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 ABHD8Q96I13 439 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 DSN1Q9H410 356 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 ZDHHC4Q9NPG8 344 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 RPS6KA6Q9UK32 745 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 M0QX08 132 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 RFXAPO00287 272 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 TEX28O15482 410 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 C6orf47O95873 294 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 ITGAMP11215 1152 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 HLA-EP13747 358 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 ALOX12P18054 663 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 PTGER1P34995 402 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 CSNK1DP48730 415 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 HBA1P69905 142 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 TIGD6Q17RP2 521 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 LRRC70Q7Z2Q7 622 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 HEATR4Q86WZ0 1026 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 CACUL1Q86Y37 369 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 TESCQ96BS2 214 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 IL21Q9HBE4 155 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 TMEM45AQ9NWC5 275 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 C5AR2Q9P296 337 aa13.52□□□□□ -0.24
CACNA1A-228ENST00000636610 SZT2Q5T011 3432 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 PLK4O00444 970 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 TLL1O43897 1013 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 MYO1DO94832 1006 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 JUPP14923 745 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC6A12P48065 614 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 PRIM2P49643 509 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 KCNJ10P78508 379 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 CBLL1Q75N03 491 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 SERPINA11Q86U17 422 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 FAM124AQ86V42 546 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 NEIL2Q969S2 332 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 IL4I1Q96RQ9 567 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 MROQ9BYG7 248 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 WDR12Q9GZL7 423 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 SLIRPQ9GZT3 109 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 POU2F3Q9UKI9 436 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 RAB23Q9ULC3 237 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 CKAP5Q14008 2032 aa13.52□□□□□ -0.25
CACNA1A-228ENST00000636610 PNMA8CA0A1B0GUJ8 204 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 PCDH17O14917 1159 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SERPINB10P48595 397 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 RGNQ15493 299 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 MED22Q15528 200 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SZRD1Q7Z422 152 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 KCNS3Q9BQ31 491 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 CENPOQ9BU64 300 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 FAM83DQ9H4H8 585 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 ATAD3AQ9NVI7 634 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 PLAGL1Q9UM63 463 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SMIM30A4D0T7 59 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 FADS2P1A8MWK0 482 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 CCL16O15467 120 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 GCM2O75603 506 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 PTHP01270 115 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 URODP06132 367 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 IGFBP1P08833 259 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 GPX2P18283 190 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 RCVRNP35243 200 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 METAP1P53582 386 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 ACOX1Q15067 660 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 EXOC3L2Q2M3D2 409 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 OLIG3Q7RTU3 272 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 TSEN54Q7Z6J9 526 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 TSPYL5Q86VY4 417 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC7A5P1Q8MH63 180 aa13.51□□□□□ -0.25
CACNA1A-228ENST00000636610 STX19Q8N4C7 294 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms