RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, human

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK7-215	ENST00000629350	KLHL18	O94889	574 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	WISP3	O95389	354 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	NPPB	P16860	134 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	IL1RN	P18510	177 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	SOX8	P57073	446 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	TAS2R39	P59534	338 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	UBAP2L	Q14157	1087 aa	Known RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	FAM214A	Q32MH5	1076 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	TUBB8	Q3ZCM7	444 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	ATG9B	Q674R7	924 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	UGT3A1	Q6NUS8	523 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	LANCL3	Q6ZV70	420 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	PCGF5	Q86SE9	256 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	GALNT7	Q86SF2	657 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	ZC3HC1	Q86WB0	502 aa	Known RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	PDIK1L	Q8N165	341 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	MYO1H	Q8N1T3	1032 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	PSMF1	Q92530	271 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	MIEF2	Q96C03	454 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	SNRNP40	Q96DI7	357 aa	Known RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	MMAB	Q96EY8	250 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	FER1L6-AS2	Q96M78	137 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	IP6K3	Q96PC2	410 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	AICDA	Q9GZX7	198 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	PARVB	Q9HBI1	364 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	ASF1B	Q9NVP2	202 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	UTP6	Q9NYH9	597 aa	Known RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	MOCS1	Q9NZB8	636 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	HCN3	Q9P1Z3	774 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	LRBA	P50851	2863 aa		13.53	□□□□□ -0.24
CDK7-215	ENST00000629350	ZGRF1	Q86YA3	2104 aa		13.52	□□□□□ -0.24
CDK7-215	ENST00000629350	IGHV3-20	A0A0C4DH32	117 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	IDS	B3KWA1	339 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	SGK494	L7N484	410 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	CCNDBP1	O95273	360 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	GUCA1C	O95843	209 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	C8G	P07360	202 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	ZNF37A	P17032	561 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	SAT1	P21673	171 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	HSD17B2	P37059	387 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	ST13	P50502	369 aa	Known RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	ARL4C	P56559	192 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	ABAT	P80404	500 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	SRSF11	Q05519	484 aa	Known RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	AIMP2	Q13155	320 aa	Known RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	SP140	Q13342	867 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	PCOLCE	Q15113	449 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	CATSPERE	Q5SY80	951 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	PRMT9	Q6P2P2	845 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	IGFL3	Q6UXB1	125 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	STRA8	Q7Z7C7	330 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	CISD2	Q8N5K1	135 aa	Known RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	OR5T3	Q8NGG3	340 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	OR56A3	Q8NH54	315 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	TM4SF19	Q96DZ7	209 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	TSNARE1	Q96NA8	513 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	NAT9	Q9BTE0	207 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	DRC3	Q9H069	523 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	CAB39L	Q9H9S4	337 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	SEMA3G	Q9NS98	782 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	NXT1	Q9UKK6	140 aa	Known RBP	13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	PCDHGB7	Q9Y5F8	929 aa		13.52	□□□□□ -0.25
CDK7-215	ENST00000629350	FAM95C	A0A1B0GW59	222 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	CCDC188	H7C350	402 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	RDH16	O75452	317 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	F10	P00742	488 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	ACPP	P15309	386 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	SSTR1	P30872	391 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	RGS4	P49798	205 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	MGAT5	Q09328	741 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	FRG1	Q14331	258 aa	Known RBP	13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	FBXO48	Q5FWF7	155 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	FAM45BP	Q6NSW5	357 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	LCTL	Q6UWM7	567 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	IGFL2	Q6UWQ7	119 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	ZDHHC24	Q6UX98	284 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	LINC00696	Q6ZRV3	163 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350		Q6ZS92	163 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	SLC26A11	Q86WA9	606 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	ZBED8	Q8IZ13	594 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	SPATA6L	Q8N4H0	392 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	GALNT11	Q8NCW6	608 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	SPATA4	Q8NEY3	305 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	FAM45A	Q8TCE6	357 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	NEIL2	Q969S2	332 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	RERG	Q96A58	199 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	FBXL8	Q96CD0	374 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	THOC3	Q96J01	351 aa	Known RBP	13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	YIPF2	Q9BWQ6	316 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	VN1R1	Q9GZP7	353 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	ARL15	Q9NXU5	204 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	C5AR2	Q9P296	337 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	B3GNT3	Q9Y2A9	372 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	VWA7	Q9Y334	891 aa		13.51	□□□□□ -0.25
CDK7-215	ENST00000629350	IGHV1-45	A0A0A0MS14	117 aa		13.5	□□□□□ -0.25
CDK7-215	ENST00000629350		A0A1W2PQ72	361 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms