RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 C1orf21Q9H246 121 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 CCDC167Q9P0B6 97 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 EPHA6Q9UF33 1036 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 RNF215Q9Y6U7 377 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 DYTNA2CJ06 578 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SNRPB2P08579 225 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 BCKDHAP12694 445 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PNLIPP16233 465 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 TYRP1P17643 537 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 JAK1P23458 1154 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PTPN4P29074 926 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 BCL6P41182 706 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 ARFIP1P53367 373 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 LPAL2Q16609 132 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 KHDRBS2Q5VWX1 349 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 CYB5D1Q6P9G0 228 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 FIGLAQ6QHK4 219 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 GLB1L3Q8NCI6 653 aaPredicted RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 BAHD1Q8TBE0 780 aaPredicted RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PROKR1Q8TCW9 393 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 CREB3L4Q8TEY5 395 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 FSCN3Q9NQT6 498 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PCDHGA4Q9Y5G9 962 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SNRNP200O75643 2136 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 ANKRD28O15084 1053 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 NCALDP61601 193 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 GPLD1P80108 840 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SNX32Q86XE0 403 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 GATAD2AQ86YP4 633 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 FUNDC1Q8IVP5 155 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 METTL4Q8N3J2 472 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 LIX1Q8N485 282 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 POU5F2Q8N7G0 328 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SLC7A6OSQ96CW6 309 aaPredicted RBP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 CD180Q99467 661 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 RTKNQ9BST9 563 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 ABCG4Q9H172 646 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 LRMDAQ9H2I8 198 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 ARRDC1-AS1Q9H2J1 176 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 OR51B5Q9H339 312 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SEMA6CQ9H3T2 930 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 IL21RQ9HBE5 538 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 C1GALT1Q9NS00 363 aa13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLTCL1-212ENST00000622493 BBIP1A8MTZ0 92 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 B2RBV5 119 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 CLDN8P56748 225 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 UFM1P61960 85 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 RCAN2Q14206 197 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 ZIC1Q15915 447 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 ADPRMQ3LIE5 342 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 TMEM35AQ53FP2 167 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 PLA2G2CQ5R387 149 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 FCRL6Q6DN72 434 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 FBXO42Q6P3S6 717 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 BLOC1S3Q6QNY0 202 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 ASRGL1Q7L266 308 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 CARFQ8N187 725 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 C1orf52Q8N6N3 182 aaKnown RBP13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 SRFBP1Q8NEF9 429 aaKnown RBP13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 AHCYL2Q96HN2 611 aaKnown RBP13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 ZFYVE21Q9BQ24 234 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 DPY30Q9C005 99 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 EFCAB1Q9HAE3 211 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 GMEB2Q9UKD1 530 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 PILRAQ9UKJ1 303 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 MAPRE3Q9UPY8 281 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 DLGAP4Q9Y2H0 992 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 KLHL20Q9Y2M5 609 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 R4GN57 208 aa13.6□□□□□ -0.23
CLTCL1-212ENST00000622493 IGHV1OR21-1A0A087WYE8 117 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 FAM234BA2RU67 622 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 LRIT2A6NDA9 550 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 TRIM38O00635 465 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 NRP2O60462 931 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 PRMT3O60678 531 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 ZNF883P0CG24 379 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 ENGP17813 658 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 SDC1P18827 310 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 CDH3P22223 829 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 TIA1P31483 386 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 ASMTP46597 345 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 LSSP48449 732 aa13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 POLR2JP52435 117 aaKnown RBP13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
CLTCL1-212ENST00000622493 NME5P56597 212 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms