RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAM120CQ9NX05 1096 aaKnown RBP3.56□□□□□ -1.84
BRCA1-229ENST00000621897 NDE1Q9NXR1 346 aa3.56□□□□□ -1.84
BRCA1-229ENST00000621897 STK26Q9P289 416 aa3.56□□□□□ -1.84
BRCA1-229ENST00000621897 MORF4L1Q9UBU8 362 aa3.56□□□□□ -1.84
BRCA1-229ENST00000621897 MOSPD1Q9UJG1 213 aa3.56□□□□□ -1.84
BRCA1-229ENST00000621897 FBXL5Q9UKA1 691 aa3.56□□□□□ -1.84
BRCA1-229ENST00000621897 IGKV6D-41A0A0C4DH26 115 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 TRBV5-5A0A0J9YX44 114 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 A0A1W2PPK0 400 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 DDX39AO00148 427 aaKnown RBP3.55□□□□□ -1.84
BRCA1-229ENST00000621897 FMO6PO60774 539 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 KIAA0754O94854 1291 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 GP1BBP13224 206 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 IRF2P14316 349 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 IFNAR1P17181 557 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 CYP11B2P19099 503 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 NNMTP40261 264 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 PGFP49763 221 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 DNA2P51530 1060 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 ZNF75DP51815 510 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 KLC1Q07866 573 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 CDH18Q13634 790 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 TMEM132DQ14C87 1099 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 IL17RELQ6ZVW7 336 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 RUFY3Q7L099 469 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 PPP1R42Q7Z4L9 355 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 SLFN11Q7Z7L1 901 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 ADGRA1Q86SQ6 560 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 CCDC170Q8IYT3 715 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 TMCO5AQ8N6Q1 288 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 SPC24Q8NBT2 197 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 TEKT4Q8WW24 435 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 ATXN7L3BQ96GX2 97 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 C2orf48Q96LS8 159 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 TDRD1Q9BXT4 1180 aaKnown RBP3.55□□□□□ -1.84
BRCA1-229ENST00000621897 DNAI2Q9GZS0 605 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 NT5C3AQ9H0P0 336 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 ANKZF1Q9H8Y5 726 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 PANK3Q9H999 370 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 FANCFQ9NPI8 374 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 EXTL2Q9UBQ6 330 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-229ENST00000621897 SLC24A2Q9UI40 661 aa3.55□□□□□ -1.84
BRCA1-229ENST00000621897 PPIEQ9UNP9 301 aaKnown RBP3.55□□□□□ -1.84
BRCA1-229ENST00000621897 H0YAE9 185 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 CCL24O00175 119 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 O00370 1275 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 PTGESO14684 152 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 CASQ2O14958 399 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 TXNL1O43396 289 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 PALMO75781 387 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 ATP5BP06576 529 aaKnown RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 GAP43P17677 238 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 MAPK3P27361 379 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 VAMP7P51809 220 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 LIMK2P53671 638 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 COG2Q14746 738 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 MTHFSDQ2M296 383 aaKnown RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 GDPGP1Q6ZNW5 385 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 ZER1Q7Z7L7 766 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 POM121L12Q8N7R1 296 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 SYT2Q8N9I0 419 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 KCTD6Q8NC69 237 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 MNS1Q8NEH6 495 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 OR7A2PQ8NGA2 310 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 PTP4A1Q93096 173 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 C16orf45Q96MC5 204 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 GSDMAQ96QA5 445 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 PAIP2Q9BPZ3 127 aaKnown RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 GPR88Q9GZN0 384 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 NYXQ9GZU5 481 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 ZMYND12Q9H0C1 365 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 SUN2Q9UH99 717 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 DDX25Q9UHL0 483 aaKnown RBP3.54□□□□□ -1.84
BRCA1-229ENST00000621897 LAMP5Q9UJQ1 280 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 KIF3AQ9Y496 699 aa3.54□□□□□ -1.84
BRCA1-229ENST00000621897 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ASB14A6NK59 587 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 PSMA7O14818 248 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SEC22BO75396 215 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SNX4O95219 450 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SLU7O95391 586 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ACSL3O95573 720 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ATP1B1P05026 303 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 PCP11498 1178 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CD22P20273 847 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 HOXD10P28358 340 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 EEF1DP29692 281 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TCF7P36402 384 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 LHX1P48742 406 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 RAD23AP54725 363 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 POLR2FP61218 127 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 IRX4P78413 519 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 MYL7Q01449 175 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CUL3Q13618 768 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TAB1Q15750 504 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 KYNUQ16719 465 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TMEM266Q2M3C6 531 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms